UCNE: SOX6_Jonathan
(id = 8478)

General information about the entry
Entry location:intron
Position:chr11:16321906-16322179
Length:274 nt
Sequence:SOX6_Jonathan.fasta
Overlapping gene:SOX6
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX6_cluster: chr11:15389475-16621980
External links:
CONDOR database:CRCNE00002256;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:12357664-12357937        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr7:115755177-115755450   Identity: 98.18%    E-value: 1.2e-61   Bit-score: 242.1

Armadillo (dasNov1):
Region #1:   scaffold_298014:564-837   Identity: 99.64%    E-value: 1.1e-57   Bit-score: 229.1

Opossum (monDom5):
Region #1:   chr5:245206297-245206570   Identity: 96.35%    E-value: 7.8e-54   Bit-score: 216.5

Platypus (ornAna1):
Region #1:   Ultra270:1060997-1061270   Identity: 98.18%    E-value: 6.5e-56   Bit-score: 222.5

Zebra_finch (taeGut1):
Region #1:   chr5:11015501-11015774   Identity: 94.16%    E-value: 4.7e-53   Bit-score: 212.4

Lizard (anoCar2):
Region #1:   chrUn_AAWZ02037668:5120-5392   Identity: 94.89%    E-value: 2.9e-57   Bit-score: 226.9

Painted_turtle (chrPic1):
Region #1:   JH584746:297764-298037   Identity: 95.99%    E-value: 1.2e-54   Bit-score: 218.7

Xenopus (xenTro3):
Region #1:   GL173441:41696-41956   Identity: 75%    E-value: 4e-24   Bit-score: 116.6

Fugu (fr2):
Region #1:   chrUn:7094358-7094580   Identity: 75.65%    E-value: 1.2e-28   Bit-score: 126.2

Medaka (oryLat2):
Region #1:   chr3:17601412-17601662   Identity: 74.42%    E-value: 4.3e-30   Bit-score: 131.1

Stickleback (gasAcu1):
Region #1:   chrII:9554203-9554422   Identity: 75.77%    E-value: 4.8e-27   Bit-score: 121.1

Tetraodon (tetNig2):
Region #1:   chr5:6913317-6913537   Identity: 76.09%    E-value: 1.1e-28   Bit-score: 126.4

Zebrafish (danRer7):
Region #1:   chr7:28457976-28458213   Identity: 61.36%    E-value: 3.4e-07   Bit-score: 55.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):