UCNE: SOX6_Ryan
(id = 8499)

General information about the entry
Entry location:UTR
Position:chr11:16461607-16462151
Length:545 nt
Sequence:SOX6_Ryan.fasta
Overlapping gene:SOX6
Paralogs:chr12:24291995-24292161: SOX5_Ryan;
Ultraconserved Genomic Regulatory Block (UGRB): SOX6_cluster: chr11:15389475-16621980
External links:
CONDOR database:CRCNE00002243; CRCNE00002242;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:12452184-12452728        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr7:115904692-115905235   Identity: 97.43%    E-value: 9.6e-118   Bit-score: 429.4
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_3013:78825-79359   Identity: 98.13%    E-value: 8.6e-105   Bit-score: 386.5
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr5:245035147-245035691   Identity: 97.43%    E-value: 2.8e-105   Bit-score: 388.4
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra270:912757-913299   Identity: 98.16%    E-value: 4.5e-123   Bit-score: 446.6
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr5:11094090-11094633   Identity: 98.16%    E-value: 2.6e-117   Bit-score: 426.8
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr1:66124657-66125202   Identity: 96.7%    E-value: 1.8e-119   Bit-score: 434.5
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584746:192145-192685   Identity: 97.97%    E-value: 5.5e-116   Bit-score: 423.5

Xenopus (xenTro3):
Region #1:   GL173441:115752-115913   Identity: 79.27%    E-value: 4.6e-14   Bit-score: 84.1
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:7073902-7074433   Identity: 83.55%    E-value: 5.4e-99   Bit-score: 360.9
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr3:17574874-17575391   Identity: 83.14%    E-value: 4.1e-91   Bit-score: 334.8
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrII:9529398-9529919   Identity: 84.14%    E-value: 1.2e-98   Bit-score: 359.9
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr5:6934683-6935201   Identity: 84.02%    E-value: 1.9e-98   Bit-score: 359.1
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr7:28409491-28410009   Identity: 85.14%    E-value: 4.6e-81   Bit-score: 302.3
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):