UCNE: SOX6_Xavier
(id = 8510)

General information about the entry
Entry location:intergenic
Position:chr11:16621695-16621980
Length:286 nt
Sequence:SOX6_Xavier.fasta
Upstream gene:SOX6
Downstream gene:C11orf58
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX6_cluster: chr11:15389475-16621980
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:12546228-12546513        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr7:116027203-116027485   Identity: 95.1%    E-value: 7.2e-50   Bit-score: 203

Armadillo (dasNov1):
Region #1:   scaffold_9438:47909-48192   Identity: 95.1%    E-value: 1e-46   Bit-score: 192.6

Opossum (monDom5):
Region #1:   chr5:244888987-244889272   Identity: 96.85%    E-value: 1.3e-49   Bit-score: 202.6

Platypus (ornAna1):
Region #1:   Ultra270:774035-774321   Identity: 91.99%    E-value: 6.1e-50   Bit-score: 202.7
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr5:11168836-11169121   Identity: 96.85%    E-value: 1.2e-52   Bit-score: 211

Lizard (anoCar2):
Region #1:   chr1:66248712-66248996   Identity: 91.29%    E-value: 4.9e-50   Bit-score: 202.9

Painted_turtle (chrPic1):
Region #1:   JH584746:90392-90677   Identity: 96.85%    E-value: 9.8e-53   Bit-score: 212.4
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173441:166585-166807   Identity: 64.46%    E-value: 2.9e-09   Bit-score: 67.2

Fugu (fr2):
Medaka (oryLat2):
Region #1:   chr3:17558920-17559085   Identity: 64.41%    E-value: 7.7e-05   Bit-score: 47.3

Stickleback (gasAcu1):
Region #1:   chrII:9513176-9513361   Identity: 64.68%    E-value: 5.4e-06   Bit-score: 51.2

Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):