UCNE: SOX5_Elvira
(id = 9692)

General information about the entry
Entry location:intergenic
Position:chr12:23682574-23682800
Length:227 nt
Sequence:SOX5_Elvira.fasta
Upstream gene:ETNK1
Downstream gene:SOX5
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX5_cluster: chr12:22920003-24691414
External links:
CONDOR database:CRCNE00010399; CRCNE00010397;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:68341017-68341241        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr6:143828589-143828809   Identity: 93.39%    E-value: 4.9e-22   Bit-score: 110.2

Armadillo (dasNov1):
Region #1:   scaffold_13119:39351-39574   Identity: 97.36%    E-value: 2e-23   Bit-score: 114.9

Opossum (monDom5):
Region #1:   chr8:95399801-95400021   Identity: 93.78%    E-value: 1.1e-15   Bit-score: 89.5
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra90:6042-6247   Identity: 94.26%    E-value: 7.6e-23   Bit-score: 112.4

Zebra_finch (taeGut1):
Region #1:   chr1A:60565122-60565346   Identity: 93.89%    E-value: 1.1e-24   Bit-score: 117.9

Lizard (anoCar2):
Region #1:   chr5:7166526-7166753   Identity: 86.9%    E-value: 6.4e-16   Bit-score: 89.3

Painted_turtle (chrPic1):
Region #1:   JH584680:3899077-3899300   Identity: 94.74%    E-value: 1.4e-23   Bit-score: 115.2

Xenopus (xenTro3):
Region #1:   GL173761:221463-221674   Identity: 86.76%    E-value: 1.9e-18   Bit-score: 97.4

Fugu (fr2):
Region #1:   chrUn:280945359-280945605   Identity: 68.08%    E-value: 1.2e-12   Bit-score: 72.8

Medaka (oryLat2):
Region #1:   chr23:421383-421608   Identity: 70.31%    E-value: 1.9e-09   Bit-score: 62.3

Stickleback (gasAcu1):
Region #1:   chrIV:21305675-21305848   Identity: 75.14%    E-value: 1.6e-10   Bit-score: 65.9

Tetraodon (tetNig2):
Region #1:   chr19:6103316-6103541   Identity: 69.53%    E-value: 3.3e-12   Bit-score: 71.3

Zebrafish (danRer7):
Region #1:   chr4:16049723-16049963   Identity: 71.6%    E-value: 9.6e-07   Bit-score: 54.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):