UCNE: SOX5_Hana
(id = 9706)

General information about the entry
Entry location:intron
Position:chr12:23717307-23717792
Length:486 nt
Sequence:SOX5_Hana.fasta
Overlapping gene:SOX5
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX5_cluster: chr12:22920003-24691414
External links:
CONDOR database:CRCNE00010392; CRCNE00010391;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:68307987-68308514        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr6:143862673-143863155   Identity: 92.84%    E-value: 1e-93   Bit-score: 349.4

Armadillo (dasNov1):
Region #1:   scaffold_3991:61963-62449   Identity: 94.69%    E-value: 2.9e-88   Bit-score: 331.4
Region #2:   scaffold_13119:2252-2401   Identity: 82.35%    E-value: 6.6e-10   Bit-score: 71.1

Opossum (monDom5):
Region #1:   chr8:95357621-95358115   Identity: 94.78%    E-value: 5.7e-91   Bit-score: 340.7

Platypus (ornAna1):
Region #1:   Ultra90:64468-64958   Identity: 92.26%    E-value: 1.3e-97   Bit-score: 361.8

Zebra_finch (taeGut1):
Region #1:   chr1A:60532783-60533273   Identity: 94.7%    E-value: 4.7e-96   Bit-score: 356.1

Lizard (anoCar2):
Region #1:   chr5:7225286-7225743   Identity: 93.01%    E-value: 1.5e-82   Bit-score: 311.7

Painted_turtle (chrPic1):
Region #1:   JH584680:3857486-3857979   Identity: 96.15%    E-value: 1.9e-100   Bit-score: 371.7

Xenopus (xenTro3):
Region #1:   GL173761:207395-207651   Identity: 67.29%    E-value: 9.8e-11   Bit-score: 72.9

Fugu (fr2):
Region #1:   chrUn:280936811-280937006   Identity: 66.67%    E-value: 3.8e-11   Bit-score: 68.9

Medaka (oryLat2):
Region #1:   chr23:434962-435162   Identity: 64.04%    E-value: 2.3e-08   Bit-score: 59.7

Stickleback (gasAcu1):
Region #1:   chrIV:21316685-21316833   Identity: 74.38%    E-value: 5.7e-12   Bit-score: 71.8

Tetraodon (tetNig2):
Region #1:   chr19:6112420-6112654   Identity: 66.93%    E-value: 2.3e-13   Bit-score: 76.2

Zebrafish (danRer7):
Region #1:   chr4:16062908-16063135   Identity: 69.42%    E-value: 5.8e-14   Bit-score: 79.2

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):