UCNE: SOX5_Midori
(id = 9741)

General information about the entry
Entry location:UTR
Position:chr12:24173348-24173738
Length:391 nt
Sequence:SOX5_Midori.fasta
Overlapping gene:SOX5
Paralogs:chr11:16426504-16426697: SOX6_Midori;
Ultraconserved Genomic Regulatory Block (UGRB): SOX5_cluster: chr12:22920003-24691414
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:67996515-67996906        Identity: >95%
This UCNE has 3 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr6:144256045-144256431   Identity: 91.77%    E-value: 4.7e-90   Bit-score: 336.9
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_12:353895-354286   Identity: 97.96%    E-value: 1.6e-99   Bit-score: 368.6
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr8:94813834-94814223   Identity: 96.41%    E-value: 1.3e-98   Bit-score: 365.8
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra90:589917-590302   Identity: 92.75%    E-value: 2.2e-87   Bit-score: 327.6
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr1A:60236768-60237157   Identity: 95.14%    E-value: 8.6e-95   Bit-score: 351.6
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr5:7650433-7650854   Identity: 82.94%    E-value: 6.5e-77   Bit-score: 292.7
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584680:3472324-3472714   Identity: 95.91%    E-value: 9.2e-95   Bit-score: 352.5
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173761:41005-41231   Identity: 76.6%    E-value: 6.4e-26   Bit-score: 123
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr4:16149938-16150124   Identity: 61.78%    E-value: 2.2e-07   Bit-score: 57

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):