TAIR, TSS for known genes

Description

Transcription start sites inferred form at10 (araTha1) Genes from arabidopsis.org.

Source

Data available at: ftp://ftp.arabidopsis.org/home/tair/Genes/TAIR10_genome_release/TAIR10_gff3/TAIR10_GFF3_genes.gff
Input file formats : GFF

Samples

From Arabidopsis at10 (araTha1) Assembly

Filename Description Feature GEO-ID
1 arabidopsisTair10Genes.sga TSS from TAIR Genes TSS -

Technical Notes

Table was downloaded in September 2014
Genes were retained if annotated as "protein coding".

References

  1. Dreos, R., Ambrosini, G., Perier, R., Bucher, P
    EPD and EPDnew, high-quality promoter resources in the next-generation sequencing era. Nucleic Acids Res. (2013) D157-64. PMID: 23193273