RefSeq, TSS and other annotations for known genes.

Description

Genome annotation from RefSeq, restricted to gene features such as transcription start and end sites, exon start sites, intron start site and CDS start sites.

Source

Samples

From C. elegans (Oct 2010 WBcel215/ce10).

Genome Annotation:

Filename Description Feature GEO-ID
1 CeRefseqTss.sga Transcript start sites TSS -
2 CeRefseqTes.sga Transcript end sites TES -
3 CeRefseqCdsStart.sga CDS start sites CDS -
4 CeRefseqEss.sga Exon start sites ESS -
5 CeRefseqIss.sga Intron start sites ISS -

Technical Notes

All fields from the primary (RefSeq) table were downloaded. Samples were generated from the input TXT file with a custom made awk script.

References

Last update: 25 Sep 2017