Nucleosome occupancy profiles of different developmental stages in C. elegans: embryos, germlineless adults, germ line containing adults, and XO hermaphrodites at L3 larval stage. A control sample is also present.
|1||GSM514735.sga||Mixed stage embryos||MNase||GSM514735|
|2||GSM514736.sga||Young germline-less adults||MNase||GSM514736|
|3||GSM590213.sga||Young germline containing adults||MNase||GSM590213|
|4||GSM590214.sga||L3 stage XO hermaphrodites||MNase||GSM590214|
SRA files were downloaded from GEO GSE20136 and converted in FASTQ using fastq-dump program from sratoolkit. Mapping was done using Bowtie and sam files were converted in sga files using samtools and chipseq.