Gan 2010, histone modifications in S2 and testis cells

Description:

Profiling chromatin modifications using antibodies against 3 histone modifications and RNA Pol II in S2 and bam testis cells.

Source

Files downloaded from GEO series: GSE19325
Input file format: BED

Samples

From D. melanogaster (Aug 2014 BDGP Rel6 + ISO1 MT/dm6)

Filename Description Feature GEO-ID
1 GSM480156_dm3-S2-H3K4me3.sga S2 cell, H3K4me3 H3K4me3 GSM480156
2 GSM480157_dm3-S2-H3K27me3.sga S2 cell, H3K27me3 H3K27me3 GSM480157
3 GSM480158_dm3-S2-H3K36me3.sga S2 cell, H3K36me3 H3K36me3 GSM480158
4 GSM480159_dm3-S2-PolII.sga S2 cell, PolII PolII GSM480159
5 GSM480446_dm3-bam-H3K4me3.sga Testis cell, H3K4me3 H3K4me3 GSM480446
6 GSM480447_dm3-bam-H3K27me3.sga Testis cell, H3K27me3 H3K27me3 GSM480447
7 GSM480448_dm3-bam-H3K36me3.sga Testis cell, H3K36me3 H3K36me3 GSM480448
8 GSM480449_dm3-bam-PolII.sga Testis cell, PolII PolII GSM480449

Technical Notes

This dataset was lifted over from dm3.

References

  1. Gan Q, Schones DE, Ho Eun S, Wei G et al.
    Monovalent and unpoised status of most genes in undifferentiated cell-enriched Drosophila testis. Genome Biol 2010;11(4):R42. PMID:20398323

  2. GEO series GSE19325 Monovalent and unpoised status of most genes in undifferentiated cell-enriched Drosophila testis.