Hoskins 2011, Drosophila embryo cap analysis of gene expression (CAGE)

Description

This series contains only the CAGE data from the paper cited below. The RLM-RACE and cap-trapped ESTs are not included.

Source

Mapped sequence tags were extracted from Supplementary Data File 1 available from Genome Research at:

Samples

From D. melanogaster (Aug 2014 BDGP Rel6 + ISO1 MT/dm6).

Filename Description Feature GEO-ID
1 embryo_cage.sga Embryo CAGE TSS -

Technical Notes

This dataset was lifted over from dm3.

References

  1. Hoskins RA, Landolin JM, Brown JB, Sandler JE et al.
    Genome-wide analysis of promoter architecture in Drosophila melanogaster. Genome Res. 2011 Feb;21(2):182-92. PMID: 21177961

Genome browser viewable files

WIG files are available at: