Koeppel 2011, p53 and p73 isoforms in Saos-2 osteosarcoma cell line

Description

ChIP-seq against p53 and p73 isoforms (TAp73α and TAp73β) in human osteosarcoma cell lines Saos-2. Saos-2 input DNA sample used as control.

Source

Samples

From Human Mar. 2006 (GRCh36/hg18) Assembly.

ChIP-seq data:

Filename Description Feature GEO-ID
1 GSM501686_ChIP_input.sga Osteosarcoma input input GSM501686
2 GSM501687_ChIP_TAp73alpha_R1.sga Osteosarcoma TAp73alpha rep1 TAp73alpha GSM501687
3 GSM501688_ChIP_TAp73alpha_R2.sga Osteosarcoma TAp73alpha rep2 TAp73alpha GSM501688
4 GSM501689_ChIP_TAp73beta_R1.sga Osteosarcoma TAp73beta rep1 TAp73beta GSM501689
5 GSM501690_ChIP_TAp73beta_R2.sga Osteosarcoma TAp73beta rep2 TAp73beta GSM501690
6 GSM501691_ChIP_p53_R1.sga Osteosarcoma p53 rep1 p53 GSM501691
7 GSM501692_ChIP_p53_R2.sga Osteosarcoma p53 rep2 p53 GSM501692

Two biological replicates were sequenced for all ChIP samples.

Technical Notes

SGA conversion was carried out using bed2sga.pl (ChIP-seq).

References


Last update: 14 Dec 2015