Fetal adrenal glands.

Description

This samples serie was produced as part of the RoadMap Project.

Source

Files downloaded from GEO FTP server: ftp://ftp.ncbi.nlm.nih.gov/pub/geo/DATA/roadmapepigenomics/by_sample/
Input file format: BED

Samples

From Human Feb. 2009 (GRCh37/hg19) Assembly.

ChIP-seq data:

Filename Description Feature GEO-ID
1 GSM1160190_UW.Fetal_Adrenal_Gland.H3K27ac.H-24800.Histone.DS23304.sga Fetal Adrenal Gland|H3K27ac H3K27ac GSM1160190
2 GSM1160192_UW.Fetal_Adrenal_Gland.H3K27me3.H-24800.Histone.DS23067.sga Fetal Adrenal Gland|H3K27me3 H3K27me3 GSM1160192
3 GSM1160196_UW.Fetal_Adrenal_Gland.H3K36me3.H-24800.Histone.DS23068.sga Fetal Adrenal Gland|H3K36me3 H3K36me3 GSM1160196
4 GSM1102796_UW.Fetal_Adrenal_Gland.H3K4me1.H-24800.Histone.DS23065.sga Fetal Adrenal Gland|H3K4me1 H3K4me1 GSM1102796
5 GSM1160198_UW.Fetal_Adrenal_Gland.H3K4me3.H-24800.Histone.DS23063.sga Fetal Adrenal Gland|H3K4me3 H3K4me3 GSM1160198
6 GSM1160201_UW.Fetal_Adrenal_Gland.H3K9me3.H-24800.Histone.DS23066.sga Fetal Adrenal Gland|H3K9me3 H3K9me3 GSM1160201
7 GSM1160207_UW.Fetal_Adrenal_Gland.Input.H-24800.Histone.DS23062.sga Fetal Adrenal Gland|Input Input GSM1160207

DNase FAIRE data:

Filename Description Feature GEO-ID
1 GSM1027310_UW.Fetal_Adrenal_Gland.ChromatinAccessibility.H-24272.DNase.DS19395.sga Fetal Adrenal Gland|DNase-seq|rep 1 DNase-seq GSM1027310
2 GSM1027311_UW.Fetal_Adrenal_Gland.ChromatinAccessibility.H-24279.DNase.DS19583.sga Fetal Adrenal Gland|DNase-seq|rep 2 DNase-seq GSM1027311
3 GSM530653_UW.Fetal_Adrenal_Gland.ChromatinAccessibility.H-22662.DS12528.sga Fetal Adrenal Gland|DNase-seq|rep 3 DNase-seq GSM530653
4 GSM817165_UW.Fetal_Adrenal_Gland.ChromatinAccessibility.H-23769.DS17319.sga Fetal Adrenal Gland|DNase-seq|rep 4 DNase-seq GSM817165
5 GSM817167_UW.Fetal_Adrenal_Gland.ChromatinAccessibility.H-23887.DS17677.sga Fetal Adrenal Gland|DNase-seq|rep 5 DNase-seq GSM817167
6 GSM878658_UW.Fetal_Adrenal_Gland.ChromatinAccessibility.H-24409.DS20343.sga Fetal Adrenal Gland|DNase-seq|rep 6 DNase-seq GSM878658

Technical Notes

BED files were downloaded from the FTP and converted in SGA format using bed2sga (ChIP-seq).

References

Genome browser viewable files