Embryonic Stem Cells.

Description

This samples serie was produced as part of the RoadMap Project.

Source

Files downloaded from GEO FTP server: ftp://ftp.ncbi.nlm.nih.gov/pub/geo/DATA/roadmapepigenomics/by_sample/
Input file format: BED

Samples

From H. sapiens (Feb 2009 GRCh37/hg19).

ChIP-seq data:

	Filename	Description	Feature	GEO-ID
1	GSM537627_BI.ES-I3.H3K27me3.Solexa-12678.sga	ES-I3\|H3K27me3\|rep 1	H3K27me3	GSM537627
2	GSM537648_BI.ES-I3.H3K27me3.Solexa-10213-15380.sga	ES-I3\|H3K27me3\|rep 2	H3K27me3	GSM537648
3	GSM537669_BI.ES-I3.H3K36me3.Solexa-15381.sga	ES-I3\|H3K36me3\|rep 1	H3K36me3	GSM537669
4	GSM537672_BI.ES-I3.H3K36me3.Solexa-16493.sga	ES-I3\|H3K36me3\|rep 2	H3K36me3	GSM537672
5	GSM537668_BI.ES-I3.H3K4me1.Solexa-15382.sga	ES-I3\|H3K4me1\|rep 1	H3K4me1	GSM537668
6	GSM772789_BI.ES-I3.H3K4me1.Lib_MC_20100211_02--ChIP_MC_20100208_02_hES_I3_TESR_H3K4Me1.sga	ES-I3\|H3K4me1\|rep 2	H3K4me1	GSM772789
7	GSM537626_BI.ES-I3.H3K4me3.Solexa-12681.sga	ES-I3\|H3K4me3\|rep 1	H3K4me3	GSM537626
8	GSM537665_BI.ES-I3.H3K4me3.Solexa-15474.sga	ES-I3\|H3K4me3\|rep 2	H3K4me3	GSM537665
9	GSM537624_BI.ES-I3.H3K9ac.Solexa-12682.sga	ES-I3\|H3K9ac\|rep 1	H3K9ac	GSM537624
10	GSM537670_BI.ES-I3.H3K9ac.Solexa-15383.sga	ES-I3\|H3K9ac\|rep 2	H3K9ac	GSM537670
11	GSM537625_BI.ES-I3.H3K9me3.Solexa-12683-16494.sga	ES-I3\|H3K9me3\|rep 1	H3K9me3	GSM537625
12	GSM537664_BI.ES-I3.H3K9me3.Solexa-15475.sga	ES-I3\|H3K9me3\|rep 2	H3K9me3	GSM537664
13	GSM537647_BI.ES-I3.Input.Solexa-10219.sga	ES-I3\|Input\|rep 1	WCE	GSM537647
14	GSM621386_BI.ES-I3.Input.Lib_MC_20090522_07--ChIP_MC_20090519_07_hES_I3_TESR_WCE.sga	ES-I3\|Input\|rep 2	WCE	GSM621386
15	GSM537657_BI.ES-WA7.H3K27me3.Solexa-12609.sga	ES-WA7\|H3K27me3	H3K27me3	GSM537657
16	GSM537640_BI.ES-WA7.H3K36me3.Solexa-12610.sga	ES-WA7\|H3K36me3	H3K36me3	GSM537640
17	GSM537641_BI.ES-WA7.H3K4me1.Solexa-12611.sga	ES-WA7\|H3K4me1	H3K4me1	GSM537641
18	GSM537623_BI.ES-WA7.H3K4me3.Solexa-13062.sga	ES-WA7\|H3K4me3	H3K4me3	GSM537623
19	GSM669896_BI.ES-WA7.H3K9ac.Lib_MC_20100818_06--ChIP_MC_20100816_01_WA07_H3K9Ac.sga	ES-WA7\|H3K9ac	H3K9ac	GSM669896
20	GSM537639_BI.ES-WA7.H3K9me3.Solexa-12613.sga	ES-WA7\|H3K9me3	H3K9me3	GSM537639
21	GSM669926_BI.ES-WA7.Input.Lib_MC_20100211_05--ChIP_MC_20100208_05_WA07_WCE.sga	ES-WA7\|Input	WCE	GSM669926
22	GSM908938_UCSD.H1.H2A.Z.AY1.sga	H1\|H2A	H2A.Z	GSM908938
23	GSM602257_UCSD.H1.H2AK5ac.YL97.sga	H1\|H2AK5ac\|rep 1	H2AK5ac	GSM602257
24	GSM602258_UCSD.H1.H2AK5ac.SAK201.sga	H1\|H2AK5ac\|rep 2	H2AK5ac	GSM602258
25	GSM605295_UCSD.H1.H2BK120ac.SAK206.sga	H1\|H2BK120ac\|rep 1	H2BK120ac	GSM605295
26	GSM789280_UCSD.H1.H2BK120ac.AK146.sga	H1\|H2BK120ac\|rep 2	H2BK120ac	GSM789280
27	GSM789281_UCSD.H1.H2BK120ac.SK530.sga	H1\|H2BK120ac\|rep 3	H2BK120ac	GSM789281
28	GSM605296_UCSD.H1.H2BK12ac.YL93.sga	H1\|H2BK12ac\|rep 1	H2BK12ac	GSM605296
29	GSM605297_UCSD.H1.H2BK12ac.SAK203.sga	H1\|H2BK12ac\|rep 2	H2BK12ac	GSM605297
30	GSM605298_UCSD.H1.H2BK15ac.YL206.sga	H1\|H2BK15ac\|rep 1	H2BK15ac	GSM605298
31	GSM605299_UCSD.H1.H2BK15ac.SAK204.sga	H1\|H2BK15ac\|rep 2	H2BK15ac	GSM605299
32	GSM605300_UCSD.H1.H2BK20ac.YL207.sga	H1\|H2BK20ac\|rep 1	H2BK20ac	GSM605300
33	GSM605301_UCSD.H1.H2BK20ac.SAK205.sga	H1\|H2BK20ac\|rep 2	H2BK20ac	GSM605301
34	GSM605302_UCSD.H1.H2BK5ac.YL98.sga	H1\|H2BK5ac\|rep 1	H2BK5ac	GSM605302
35	GSM605303_UCSD.H1.H2BK5ac.SAK202.sga	H1\|H2BK5ac\|rep 2	H2BK5ac	GSM605303
36	GSM667614_UCSD.H1.H3K14ac.AK52.sga	H1\|H3K14ac\|rep 1	H3K14ac	GSM667614
37	GSM667615_UCSD.H1.H3K14ac.AK58.sga	H1\|H3K14ac\|rep 2	H3K14ac	GSM667615
38	GSM602259_UCSD.H1.H3K18ac.SAK208.sga	H1\|H3K18ac\|rep 1	H3K18ac	GSM602259
39	GSM605304_UCSD.H1.H3K18ac.LL321.sga	H1\|H3K18ac\|rep 2	H3K18ac	GSM605304
40	GSM667617_UCSD.H1.H3K23ac.AK53.sga	H1\|H3K23ac\|rep 1	H3K23ac	GSM667617
41	GSM667618_UCSD.H1.H3K23ac.AK59.sga	H1\|H3K23ac\|rep 2	H3K23ac	GSM667618
42	GSM605305_UCSD.H1.H3K23me2.YL198.sga	H1\|H3K23me2\|rep 1	H3K23me2	GSM605305
43	GSM605306_UCSD.H1.H3K23me2.SAK210.sga	H1\|H3K23me2\|rep 2	H3K23me2	GSM605306
44	GSM466732_UCSD.H1.H3K27ac.LL313.sga	H1\|H3K27ac\|rep 1	H3K27ac	GSM466732
45	GSM663427_UCSD.H1.H3K27ac.SAK270.sga	H1\|H3K27ac\|rep 2	H3K27ac	GSM663427
46	GSM428295_UCSF-UBC.H1.H3K27me3.H1EScd1-me3K27-A.sga	H1\|H3K27me3\|rep 1	H3K27me3	GSM428295
47	GSM433167_BI.H1.H3K27me3.Solexa-8039.sga	H1\|H3K27me3\|rep 2	H3K27me3	GSM433167
48	GSM434776_UCSD.H1.H3K27me3.LL241.sga	H1\|H3K27me3\|rep 3	H3K27me3	GSM434776
49	GSM466734_UCSD.H1.H3K27me3.LL314.sga	H1\|H3K27me3\|rep 4	H3K27me3	GSM466734
50	GSM537683_BI.H1.H3K27me3.Solexa-12523.sga	H1\|H3K27me3\|rep 5	H3K27me3	GSM537683
51	GSM605308_UCSD.H1.H3K27me3.YL95.sga	H1\|H3K27me3\|rep 6	H3K27me3	GSM605308
52	GSM409312_UCSD.H1.H3K36me3.LL220.sga	H1\|H3K36me3\|rep 1	H3K36me3	GSM409312
53	GSM428296_UCSF-UBC.H1.H3K36me3.H1EScd1-me3K36-A.sga	H1\|H3K36me3\|rep 2	H3K36me3	GSM428296
54	GSM433176_BI.H1.H3K36me3.Solexa-12524.sga	H1\|H3K36me3\|rep 3	H3K36me3	GSM433176
55	GSM450268_UCSF-UBC.H1.H3K36me3.H1EScd2-me3K36-B.sga	H1\|H3K36me3\|rep 4	H3K36me3	GSM450268
56	GSM466737_UCSD.H1.H3K36me3.LL160.sga	H1\|H3K36me3\|rep 5	H3K36me3	GSM466737
57	GSM537684_BI.H1.H3K36me3.Solexa-14961.sga	H1\|H3K36me3\|rep 6	H3K36me3	GSM537684
58	GSM605309_UCSD.H1.H3K36me3.SAK70.sga	H1\|H3K36me3\|rep 7	H3K36me3	GSM605309
59	GSM605311_UCSD.H1.H3K4ac.SAK207.sga	H1\|H3K4ac\|rep 1	H3K4ac	GSM605311
60	GSM667624_UCSD.H1.H3K4ac.AK51.sga	H1\|H3K4ac\|rep 2	H3K4ac	GSM667624
61	GSM409307_UCSD.H1.H3K4me1.LL228.sga	H1\|H3K4me1\|rep 1	H3K4me1	GSM409307
62	GSM433177_BI.H1.H3K4me1.Solexa-10529.sga	H1\|H3K4me1\|rep 2	H3K4me1	GSM433177
63	GSM434762_UCSF-UBC.H1.H3K4me1.H1EScd1-me1K4-D.sga	H1\|H3K4me1\|rep 3	H3K4me1	GSM434762
64	GSM466739_UCSD.H1.H3K4me1.LL311.sga	H1\|H3K4me1\|rep 4	H3K4me1	GSM466739
65	GSM537679_BI.H1.H3K4me1.Solexa-13061.sga	H1\|H3K4me1\|rep 5	H3K4me1	GSM537679
66	GSM605312_UCSD.H1.H3K4me1.YL131.sga	H1\|H3K4me1\|rep 6	H3K4me1	GSM605312
67	GSM602260_UCSD.H1.H3K4me2.LL322.sga	H1\|H3K4me2\|rep 1	H3K4me2	GSM602260
68	GSM602261_UCSD.H1.H3K4me2.YL96.sga	H1\|H3K4me2\|rep 2	H3K4me2	GSM602261
69	GSM409308_UCSD.H1.H3K4me3.LL227.sga	H1\|H3K4me3\|rep 1	H3K4me3	GSM409308
70	GSM410808_UCSF-UBC.H1.H3K4me3.H1EScd1-me3K4-A.sga	H1\|H3K4me3\|rep 2	H3K4me3	GSM410808
71	GSM432392_UCSF-UBC.H1.H3K4me3.H1EScd2-me3K4-C.sga	H1\|H3K4me3\|rep 3	H3K4me3	GSM432392
72	GSM433170_BI.H1.H3K4me3.Solexa-8038.sga	H1\|H3K4me3\|rep 4	H3K4me3	GSM433170
73	GSM469971_UCSD.H1.H3K4me3.LL312.sga	H1\|H3K4me3\|rep 5	H3K4me3	GSM469971
74	GSM537680_BI.H1.H3K4me3.Solexa-10398.sga	H1\|H3K4me3\|rep 6	H3K4me3	GSM537680
75	GSM537681_BI.H1.H3K4me3.Solexa-12522.sga	H1\|H3K4me3\|rep 7	H3K4me3	GSM537681
76	GSM605315_UCSD.H1.H3K4me3.SAK67.sga	H1\|H3K4me3\|rep 8	H3K4me3	GSM605315
77	GSM605317_UCSD.H1.H3K56ac.SAK211.sga	H1\|H3K56ac\|rep 1	H3K56ac	GSM605317
78	GSM667627_UCSD.H1.H3K56ac.SK300.sga	H1\|H3K56ac\|rep 2	H3K56ac	GSM667627
79	GSM605318_UCSD.H1.H3K79me1.YL82.sga	H1\|H3K79me1\|rep 1	H3K79me1	GSM605318
80	GSM605319_UCSD.H1.H3K79me1.SAK73.sga	H1\|H3K79me1\|rep 2	H3K79me1	GSM605319
81	GSM605320_UCSD.H1.H3K79me1.YL192.sga	H1\|H3K79me1\|rep 3	H3K79me1	GSM605320
82	GSM605321_UCSD.H1.H3K79me2.SAK80.sga	H1\|H3K79me2\|rep 1	H3K79me2	GSM605321
83	GSM605322_UCSD.H1.H3K79me2.YL204.sga	H1\|H3K79me2\|rep 2	H3K79me2	GSM605322
84	GSM410807_UCSF-UBC.H1.H3K9ac.H1EScd1-acK9-A.sga	H1\|H3K9ac\|rep 1	H3K9ac	GSM410807
85	GSM433171_BI.H1.H3K9ac.Solexa-12526.sga	H1\|H3K9ac\|rep 2	H3K9ac	GSM433171
86	GSM434785_UCSD.H1.H3K9ac.LL240.sga	H1\|H3K9ac\|rep 3	H3K9ac	GSM434785
87	GSM537685_BI.H1.H3K9ac.Solexa-14962.sga	H1\|H3K9ac\|rep 4	H3K9ac	GSM537685
88	GSM605323_UCSD.H1.H3K9ac.SAK68.sga	H1\|H3K9ac\|rep 5	H3K9ac	GSM605323
89	GSM428291_UCSF-UBC.H1.H3K9me3.H1EScd1-me3K9-A.sga	H1\|H3K9me3\|rep 1	H3K9me3	GSM428291
90	GSM433174_BI.H1.H3K9me3.Solexa-12525.sga	H1\|H3K9me3\|rep 2	H3K9me3	GSM433174
91	GSM450266_UCSF-UBC.H1.H3K9me3.H1EScd2-me3K9-B.sga	H1\|H3K9me3\|rep 3	H3K9me3	GSM450266
92	GSM605325_UCSD.H1.H3K9me3.LL218.sga	H1\|H3K9me3\|rep 4	H3K9me3	GSM605325
93	GSM605327_UCSD.H1.H3K9me3.YL75.sga	H1\|H3K9me3\|rep 5	H3K9me3	GSM605327
94	GSM605328_UCSD.H1.H3K9me3.YL77.sga	H1\|H3K9me3\|rep 6	H3K9me3	GSM605328
95	GSM818057_UCSD.H1.H3K9me3.AK54.sga	H1\|H3K9me3\|rep 7	H3K9me3	GSM818057
96	GSM605329_UCSD.H1.H4K20me1.YL253.sga	H1\|H4K20me1\|rep 1	H4K20me1	GSM605329
97	GSM789284_UCSD.H1.H4K20me1.SK529.sga	H1\|H4K20me1\|rep 2	H4K20me1	GSM789284
98	GSM605330_UCSD.H1.H4K5ac.LL323.sga	H1\|H4K5ac\|rep 1	H4K5ac	GSM605330
99	GSM752990_UCSD.H1.H4K5ac.SK302.sga	H1\|H4K5ac\|rep 2	H4K5ac	GSM752990
100	GSM896166_UCSD.H1.H4K8ac.AY17.sga	H1\|H4K8ac\|rep 1	H4K8ac	GSM896166
101	GSM908966_UCSD.H1.H4K8ac.AY18.sga	H1\|H4K8ac\|rep 2	H4K8ac	GSM908966
102	GSM605332_UCSD.H1.H4K91ac.YL254.sga	H1\|H4K91ac\|rep 1	H4K91ac	GSM605332
103	GSM752991_UCSD.H1.H4K91ac.SK303.sga	H1\|H4K91ac\|rep 2	H4K91ac	GSM752991
104	GSM428289_UCSF-UBC.H1.Input.TOTAL-H1EScd1.sga	H1\|Input\|rep 1	Input	GSM428289
105	GSM667641_UCSD.H1.Input.YL328.sga	H1\|Input\|rep 10	Input	GSM667641
106	GSM667642_UCSD.H1.Input.AK57.sga	H1\|Input\|rep 11	Input	GSM667642
107	GSM433179_BI.H1.Input.Solexa-10531.sga	H1\|Input\|rep 12	WCE	GSM433179
108	GSM537682_BI.H1.Input.Solexa-12532.sga	H1\|Input\|rep 13	WCE	GSM537682
109	GSM450270_UCSF-UBC.H1.Input.TOTAL-hEScd2-2.sga	H1\|Input\|rep 2	Input	GSM450270
110	GSM605333_UCSD.H1.Input.LL-H1-I1.sga	H1\|Input\|rep 3	Input	GSM605333
111	GSM605334_UCSD.H1.Input.LL-H1-I2.sga	H1\|Input\|rep 4	Input	GSM605334
112	GSM605335_UCSD.H1.Input.YL208.sga	H1\|Input\|rep 5	Input	GSM605335
113	GSM605336_UCSD.H1.Input.YL262.sga	H1\|Input\|rep 6	Input	GSM605336
114	GSM605337_UCSD.H1.Input.YL154.sga	H1\|Input\|rep 7	Input	GSM605337
115	GSM605338_UCSD.H1.Input.DM219.sga	H1\|Input\|rep 8	Input	GSM605338
116	GSM605339_UCSD.H1.Input.LLH1U.sga	H1\|Input\|rep 9	Input	GSM605339
117	GSM807391_UCSD.H9.H2A.Z.SK532.sga	H9\|H2A	H2A.Z	GSM807391
118	GSM667608_UCSD.H9.H2AK5ac.SK193.sga	H9\|H2AK5ac\|rep 1	H2AK5ac	GSM667608
119	GSM667609_UCSD.H9.H2AK5ac.AK28.sga	H9\|H2AK5ac\|rep 2	H2AK5ac	GSM667609
120	GSM752962_UCSD.H9.H2BK120ac.SK378.sga	H9\|H2BK120ac	H2BK120ac	GSM752962
121	GSM667610_UCSD.H9.H2BK12ac.AK30.sga	H9\|H2BK12ac\|rep 1	H2BK12ac	GSM667610
122	GSM667611_UCSD.H9.H2BK12ac.AK112.sga	H9\|H2BK12ac\|rep 2	H2BK12ac	GSM667611
123	GSM706062_UCSD.H9.H2BK15ac.AK113.sga	H9\|H2BK15ac\|rep 1	H2BK15ac	GSM706062
124	GSM706063_UCSD.H9.H2BK15ac.SK376.sga	H9\|H2BK15ac\|rep 2	H2BK15ac	GSM706063
125	GSM864034_UCSD.H9.H2BK15ac.AY28.sga	H9\|H2BK15ac\|rep 3	H2BK15ac	GSM864034
126	GSM752963_UCSD.H9.H2BK20ac.SK377.sga	H9\|H2BK20ac	H2BK20ac	GSM752963
127	GSM667612_UCSD.H9.H2BK5ac.YL244.sga	H9\|H2BK5ac\|rep 1	H2BK5ac	GSM667612
128	GSM667613_UCSD.H9.H2BK5ac.AK29.sga	H9\|H2BK5ac\|rep 2	H2BK5ac	GSM667613
129	GSM752964_UCSD.H9.H3K14ac.SK380.sga	H9\|H3K14ac\|rep 1	H3K14ac	GSM752964
130	GSM896161_UCSD.H9.H3K14ac.AY15.sga	H9\|H3K14ac\|rep 2	H3K14ac	GSM896161
131	GSM667616_UCSD.H9.H3K18ac.SK276.sga	H9\|H3K18ac\|rep 1	H3K18ac	GSM667616
132	GSM706064_UCSD.H9.H3K18ac.SK375.sga	H9\|H3K18ac\|rep 2	H3K18ac	GSM706064
133	GSM667619_UCSD.H9.H3K23ac.YL236.sga	H9\|H3K23ac\|rep 1	H3K23ac	GSM667619
134	GSM667620_UCSD.H9.H3K23ac.SK289.sga	H9\|H3K23ac\|rep 2	H3K23ac	GSM667620
135	GSM667621_UCSD.H9.H3K23me2.SK277.sga	H9\|H3K23me2\|rep 1	H3K23me2	GSM667621
136	GSM807396_UCSD.H9.H3K23me2.SK527.sga	H9\|H3K23me2\|rep 2	H3K23me2	GSM807396
137	GSM605307_UCSD.H9.H3K27ac.YL237.sga	H9\|H3K27ac\|rep 1	H3K27ac	GSM605307
138	GSM665037_UCSD.H9.H3K27ac.SK265.sga	H9\|H3K27ac\|rep 2	H3K27ac	GSM665037
139	GSM667622_UCSD.H9.H3K27me3.SK99.sga	H9\|H3K27me3\|rep 1	H3K27me3	GSM667622
140	GSM706066_UCSD.H9.H3K27me3.AK142.sga	H9\|H3K27me3\|rep 2	H3K27me3	GSM706066
141	GSM605310_UCSD.H9.H3K36me3.SK102.sga	H9\|H3K36me3\|rep 1	H3K36me3	GSM605310
142	GSM667623_UCSD.H9.H3K36me3.SK278.sga	H9\|H3K36me3\|rep 2	H3K36me3	GSM667623
143	GSM667625_UCSD.H9.H3K4ac.SK328.sga	H9\|H3K4ac\|rep 1	H3K4ac	GSM667625
144	GSM752976_UCSD.H9.H3K4ac.SK379.sga	H9\|H3K4ac\|rep 2	H3K4ac	GSM752976
145	GSM667626_UCSD.H9.H3K4me1.YL123.sga	H9\|H3K4me1\|rep 1	H3K4me1	GSM667626
146	GSM706071_UCSD.H9.H3K4me1.AK141.sga	H9\|H3K4me1\|rep 2	H3K4me1	GSM706071
147	GSM605314_UCSD.H9.H3K4me2.SK198.sga	H9\|H3K4me2\|rep 1	H3K4me2	GSM605314
148	GSM616127_UCSD.H9.H3K4me2.AK38.sga	H9\|H3K4me2\|rep 2	H3K4me2	GSM616127
149	GSM605316_UCSD.H9.H3K4me3.SK101.sga	H9\|H3K4me3\|rep 1	H3K4me3	GSM605316
150	GSM616128_UCSD.H9.H3K4me3.AK39.sga	H9\|H3K4me3\|rep 2	H3K4me3	GSM616128
151	GSM667628_UCSD.H9.H3K56ac.YL238.sga	H9\|H3K56ac\|rep 1	H3K56ac	GSM667628
152	GSM706076_UCSD.H9.H3K56ac.SK279.sga	H9\|H3K56ac\|rep 2	H3K56ac	GSM706076
153	GSM667629_UCSD.H9.H3K79me1.SK329.sga	H9\|H3K79me1\|rep 1	H3K79me1	GSM667629
154	GSM706077_UCSD.H9.H3K79me1.SK374.sga	H9\|H3K79me1\|rep 2	H3K79me1	GSM706077
155	GSM667630_UCSD.H9.H3K79me2.SK190.sga	H9\|H3K79me2\|rep 1	H3K79me2	GSM667630
156	GSM706078_UCSD.H9.H3K79me2.AK143.sga	H9\|H3K79me2\|rep 2	H3K79me2	GSM706078
157	GSM605324_UCSD.H9.H3K9ac.SK199.sga	H9\|H3K9ac\|rep 1	H3K9ac	GSM605324
158	GSM616129_UCSD.H9.H3K9ac.AK35.sga	H9\|H3K9ac\|rep 2	H3K9ac	GSM616129
159	GSM667631_UCSD.H9.H3K9me3.SK100.sga	H9\|H3K9me3\|rep 1	H3K9me3	GSM667631
160	GSM667632_UCSD.H9.H3K9me3.SK200.sga	H9\|H3K9me3\|rep 2	H3K9me3	GSM667632
161	GSM667633_UCSD.H9.H3K9me3.AK40.sga	H9\|H3K9me3\|rep 3	H3K9me3	GSM667633
162	GSM807403_UCSD.H9.H3T11ph.SK509.sga	H9\|H3T11ph	H3T11ph	GSM807403
163	GSM667634_UCSD.H9.H4K20me1.SK286.sga	H9\|H4K20me1	H4K20me1	GSM667634
164	GSM667635_UCSD.H9.H4K5ac.YL240.sga	H9\|H4K5ac\|rep 1	H4K5ac	GSM667635
165	GSM667636_UCSD.H9.H4K5ac.SK282.sga	H9\|H4K5ac\|rep 2	H4K5ac	GSM667636
166	GSM667637_UCSD.H9.H4K8ac.YL241.sga	H9\|H4K8ac\|rep 1	H4K8ac	GSM667637
167	GSM667638_UCSD.H9.H4K8ac.SK283.sga	H9\|H4K8ac\|rep 2	H4K8ac	GSM667638
168	GSM667639_UCSD.H9.H4K91ac.SK287.sga	H9\|H4K91ac\|rep 1	H4K91ac	GSM667639
169	GSM667640_UCSD.H9.H4K91ac.SK332.sga	H9\|H4K91ac\|rep 2	H4K91ac	GSM667640
170	GSM667643_UCSD.H9.Input.SKH9-4.sga	H9\|Input\|rep 1	Input	GSM667643
171	GSM706081_UCSD.H9.Input.AK144.sga	H9\|Input\|rep 2	Input	GSM706081
172	GSM832839_UCSD.H9.Input.SK338.sga	H9\|Input\|rep 3	Input	GSM832839
173	GSM997250_BI.HUES48.H3K27ac.DNA_Lib_2068.sga	HUES48\|H3K27ac	H3K27ac	GSM997250
174	GSM669942_BI.HUES48.H3K27me3.Lib_MC_20101025_10--ChIP_MC_20101020_10_ES_cell_HUES_48_H3K27Me3.sga	HUES48\|H3K27me3\|rep 1	H3K27me3	GSM669942
175	GSM772766_BI.HUES48.H3K27me3.Lib_EpiLabSPL_Row_1716.sga	HUES48\|H3K27me3\|rep 2	H3K27me3	GSM772766
176	GSM670039_BI.HUES48.H3K36me3.Lib_MC_20101025_09--ChIP_MC_20101020_09_ES_cell_HUES_48_H3K36Me3.sga	HUES48\|H3K36me3\|rep 1	H3K36me3	GSM670039
177	GSM772798_BI.HUES48.H3K36me3.Lib_EpiLabSPL_Row_1715.sga	HUES48\|H3K36me3\|rep 2	H3K36me3	GSM772798
178	GSM669954_BI.HUES48.H3K4me1.Lib_MC_20101025_07--ChIP_MC_20101020_07_ES_cell_HUES_48_H3K4Me1.sga	HUES48\|H3K4me1\|rep 1	H3K4me1	GSM669954
179	GSM772793_BI.HUES48.H3K4me1.Lib_EpiLabSPL_Row_1713.sga	HUES48\|H3K4me1\|rep 2	H3K4me1	GSM772793
180	GSM669936_BI.HUES48.H3K4me3.Lib_MC_20101025_08--ChIP_MC_20101020_08_ES_cell_HUES_48_H3K4Me3.sga	HUES48\|H3K4me3\|rep 1	H3K4me3	GSM669936
181	GSM772797_BI.HUES48.H3K4me3.Lib_EpiLabSPL_Row_1714.sga	HUES48\|H3K4me3\|rep 2	H3K4me3	GSM772797
182	GSM670013_BI.HUES48.H3K9ac.Lib_MC_20101025_11--ChIP_MC_20101020_11_ES_cell_HUES_48_H3K9Ac.sga	HUES48\|H3K9ac\|rep 1	H3K9ac	GSM670013
183	GSM772796_BI.HUES48.H3K9ac.Lib_EpiLabSPL_Row_1717.sga	HUES48\|H3K9ac\|rep 2	H3K9ac	GSM772796
184	GSM772780_BI.HUES48.H3K9me3.Lib_EpiLabSPL_Row_1707.sga	HUES48\|H3K9me3\|rep 1	H3K9me3	GSM772780
185	GSM772799_BI.HUES48.H3K9me3.Lib_EpiLabSPL_Row_1718.sga	HUES48\|H3K9me3\|rep 2	H3K9me3	GSM772799
186	GSM772755_BI.HUES48.Input.Lib_EpiLabSPL_Row_1725.sga	HUES48\|Input\|rep 1	WCE	GSM772755
187	GSM772794_BI.HUES48.Input.Lib_EpiLabSPL_Row_1710.sga	HUES48\|Input\|rep 2	WCE	GSM772794
188	GSM1112775_BI.HUES64.H3K27ac.DNA_Lib_834.sga	HUES64\|H3K27ac\|rep 1	H3K27ac	GSM1112775
189	GSM997249_BI.HUES64.H3K27ac.DNA_Lib_2069.sga	HUES64\|H3K27ac\|rep 2	H3K27ac	GSM997249
190	GSM669974_BI.HUES64.H3K27me3.Lib_MC_20101025_04--ChIP_MC_20101020_04_ES_cell_HUES_64_H3K27Me3.sga	HUES64\|H3K27me3\|rep 1	H3K27me3	GSM669974
191	GSM772750_BI.HUES64.H3K27me3.Lib_EpiLabSPL_Row_1722.sga	HUES64\|H3K27me3\|rep 2	H3K27me3	GSM772750
192	GSM669932_BI.HUES64.H3K36me3.Lib_MC_20101025_03--ChIP_MC_20101020_03_ES_cell_HUES_64_H3K36Me3.sga	HUES64\|H3K36me3\|rep 1	H3K36me3	GSM669932
193	GSM772751_BI.HUES64.H3K36me3.Lib_EpiLabSPL_Row_1721.sga	HUES64\|H3K36me3\|rep 2	H3K36me3	GSM772751
194	GSM669966_BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.sga	HUES64\|H3K4me1\|rep 1	H3K4me1	GSM669966
195	GSM772800_BI.HUES64.H3K4me1.Lib_EpiLabSPL_Row_1719.sga	HUES64\|H3K4me1\|rep 2	H3K4me1	GSM772800
196	GSM669967_BI.HUES64.H3K4me3.Lib_MC_20101025_02--ChIP_MC_20101020_02_ES_cell_HUES_64_H3K4Me3.sga	HUES64\|H3K4me3\|rep 1	H3K4me3	GSM669967
197	GSM772752_BI.HUES64.H3K4me3.Lib_EpiLabSPL_Row_1720.sga	HUES64\|H3K4me3\|rep 2	H3K4me3	GSM772752
198	GSM669963_BI.HUES64.H3K9ac.Lib_MC_20101025_05--ChIP_MC_20101020_05_ES_cell_HUES_64_H3K9Ac.sga	HUES64\|H3K9ac\|rep 1	H3K9ac	GSM669963
199	GSM772749_BI.HUES64.H3K9ac.Lib_EpiLabSPL_Row_1723.sga	HUES64\|H3K9ac\|rep 2	H3K9ac	GSM772749
200	GSM669928_BI.HUES64.H3K9me3.Lib_MC_20101025_06--ChIP_MC_20101020_06_ES_cell_HUES_64_H3K9Me3.sga	HUES64\|H3K9me3\|rep 1	H3K9me3	GSM669928
201	GSM772756_BI.HUES64.H3K9me3.Lib_EpiLabSPL_Row_1724.sga	HUES64\|H3K9me3\|rep 2	H3K9me3	GSM772756
202	GSM772754_BI.HUES64.Input.Lib_EpiLabSPL_Row_1726.sga	HUES64\|Input\|rep 1	WCE	GSM772754
203	GSM772807_BI.HUES64.Input.Lib_EpiLabSPL_Row_1709.sga	HUES64\|Input\|rep 2	WCE	GSM772807
204	GSM1112774_BI.HUES6.H3K27ac.DNA_Lib_835.sga	HUES6\|H3K27ac\|rep 1	H3K27ac	GSM1112774
205	GSM1112776_BI.HUES6.H3K27ac.DNA_Lib_837.sga	HUES6\|H3K27ac\|rep 2	H3K27ac	GSM1112776
206	GSM669887_BI.HUES6.H3K27me3.Lib_XZ_20101004_04--ChIP_XZ_20100930_04_ES_cell_HUES_6_H3K27Me3.sga	HUES6\|H3K27me3\|rep 1	H3K27me3	GSM669887
207	GSM669897_BI.HUES6.H3K27me3.Lib_XZ_20101004_11--ChIP_XZ_20100930_11_ES_cell_HUES_6_H3K27Me3.sga	HUES6\|H3K27me3\|rep 2	H3K27me3	GSM669897
208	GSM669892_BI.HUES6.H3K36me3.Lib_XZ_20101004_10--ChIP_XZ_20100930_10_ES_cell_HUES_6_H3K36Me3.sga	HUES6\|H3K36me3\|rep 1	H3K36me3	GSM669892
209	GSM669898_BI.HUES6.H3K36me3.Lib_XZ_20101004_03--ChIP_XZ_20100930_03_ES_cell_HUES_6_H3K36Me3.sga	HUES6\|H3K36me3\|rep 2	H3K36me3	GSM669898
210	GSM669885_BI.HUES6.H3K4me1.Lib_XZ_20101004_01--ChIP_XZ_20100930_01_ES_cell_HUES_6_H3K4Me1.sga	HUES6\|H3K4me1\|rep 1	H3K4me1	GSM669885
211	GSM669891_BI.HUES6.H3K4me1.Lib_XZ_20101004_08--ChIP_XZ_20100930_08_ES_cell_HUES_6_H3K4Me1.sga	HUES6\|H3K4me1\|rep 2	H3K4me1	GSM669891
212	GSM669889_BI.HUES6.H3K4me3.Lib_XZ_20101004_02--ChIP_XZ_20100930_02_ES_cell_HUES_6_H3K4Me3.sga	HUES6\|H3K4me3\|rep 1	H3K4me3	GSM669889
213	GSM669893_BI.HUES6.H3K4me3.Lib_XZ_20101004_09--ChIP_XZ_20100930_09_ES_cell_HUES_6_H3K4Me3.sga	HUES6\|H3K4me3\|rep 2	H3K4me3	GSM669893
214	GSM669890_BI.HUES6.H3K9ac.Lib_XZ_20101004_12--ChIP_XZ_20100930_12_ES_cell_HUES_6_H3K9Ac.sga	HUES6\|H3K9ac	H3K9ac	GSM669890
215	GSM669886_BI.HUES6.H3K9me3.Lib_XZ_20101004_06--ChIP_XZ_20100930_06_ES_cell_HUES_6_H3K9Me3.sga	HUES6\|H3K9me3\|rep 1	H3K9me3	GSM669886
216	GSM669894_BI.HUES6.H3K9me3.Lib_XZ_20101004_13--ChIP_XZ_20100930_13_ES_cell_HUES_6_H3K9Me3.sga	HUES6\|H3K9me3\|rep 2	H3K9me3	GSM669894
217	GSM669888_BI.HUES6.Input.Lib_XZ_20101004_07--ChIP_XZ_20100930_07_ES_cell_HUES_6_WCE.sga	HUES6\|Input\|rep 1	WCE	GSM669888
218	GSM669895_BI.HUES6.Input.Lib_XZ_20101004_14--ChIP_XZ_20100930_14_ES_cell_HUES_6_WCE.sga	HUES6\|Input\|rep 2	WCE	GSM669895
219	GSM1127084_UCSF-UBC.UCSF-4Star.H3K27me3.A19299.sga	UCSF-4Star\|H3K27me3	H3K27me3	GSM1127084
220	GSM1127070_UCSF-UBC.UCSF-4Star.H3K36me3.A19300.sga	UCSF-4Star\|H3K36me3	H3K36me3	GSM1127070
221	GSM1127080_UCSF-UBC.UCSF-4Star.H3K4me1.A19296.sga	UCSF-4Star\|H3K4me1	H3K4me1	GSM1127080
222	GSM1127063_UCSF-UBC.UCSF-4Star.H3K4me3.A19297.sga	UCSF-4Star\|H3K4me3	H3K4me3	GSM1127063
223	GSM1127081_UCSF-UBC.UCSF-4Star.H3K9me3.A19298.sga	UCSF-4Star\|H3K9me3	H3K9me3	GSM1127081
224	GSM1127090_UCSF-UBC.UCSF-4Star.Input.A19302.sga	UCSF-4Star\|Input	Input	GSM1127090
225	GSM941751_UCSF-UBC.UCSF-4star.H3K27me3.A14672.sga	UCSF-4star\|H3K27me3	H3K27me3	GSM941751
226	GSM941752_UCSF-UBC.UCSF-4star.H3K36me3.A14673.sga	UCSF-4star\|H3K36me3	H3K36me3	GSM941752
227	GSM941748_UCSF-UBC.UCSF-4star.H3K4me1.A14669.sga	UCSF-4star\|H3K4me1	H3K4me1	GSM941748
228	GSM941749_UCSF-UBC.UCSF-4star.H3K4me3.A14670.sga	UCSF-4star\|H3K4me3	H3K4me3	GSM941749
229	GSM941750_UCSF-UBC.UCSF-4star.H3K9me3.A14671.sga	UCSF-4star\|H3K9me3	H3K9me3	GSM941750
230	GSM941753_UCSF-UBC.UCSF-4star.Input.A14674.sga	UCSF-4star\|Input	Input	GSM941753

DNase FAIRE data:

	Filename	Description	Feature	GEO-ID
1	GSM878616_UW.H1.ChromatinAccessibility.DS18873.sga	H1\|DNase-seq\|rep 1	DNase-seq	GSM878616
2	GSM878621_UW.H1.ChromatinAccessibility.DS19100.sga	H1\|DNase-seq\|rep 2	DNase-seq	GSM878621
3	GSM878612_UW.H9.ChromatinAccessibility.DS18517.sga	H9\|DNase-seq\|rep 1	DNase-seq	GSM878612
4	GSM878613_UW.H9.ChromatinAccessibility.DS18522.sga	H9\|DNase-seq\|rep 2	DNase-seq	GSM878613

Technical Notes

BED files were downloaded from the FTP and converted in SGA format using bed2sga (ChIP-seq).

References