Adult urinary system.

Description

This samples serie was produced as part of the RoadMap Project.

Source

Files downloaded from GEO FTP server: ftp://ftp.ncbi.nlm.nih.gov/pub/geo/DATA/roadmapepigenomics/by_sample/
Input file format: BED

Samples

From Human Feb. 2009 (GRCh37/hg19) Assembly.

ChIP-seq data:

Filename Description Feature GEO-ID
1 GSM1112799_BI.Adult_Kidney.H3K27ac.153.sga Adult Kidney|H3K27ac|rep 1 H3K27ac GSM1112799
2 GSM1112806_BI.Adult_Kidney.H3K27ac.27.sga Adult Kidney|H3K27ac|rep 2 H3K27ac GSM1112806
3 GSM621634_BI.Adult_Kidney.H3K36me3.27.sga Adult Kidney|H3K36me3|rep 1 H3K36me3 GSM621634
4 GSM773000_BI.Adult_Kidney.H3K36me3.153.sga Adult Kidney|H3K36me3|rep 2 H3K36me3 GSM773000
5 GSM670025_BI.Adult_Kidney.H3K4me1.27.sga Adult Kidney|H3K4me1|rep 1 H3K4me1 GSM670025
6 GSM773001_BI.Adult_Kidney.H3K4me1.153.sga Adult Kidney|H3K4me1|rep 2 H3K4me1 GSM773001
7 GSM621648_BI.Adult_Kidney.H3K4me3.27.sga Adult Kidney|H3K4me3|rep 1 H3K4me3 GSM621648
8 GSM773005_BI.Adult_Kidney.H3K4me3.153.sga Adult Kidney|H3K4me3|rep 2 H3K4me3 GSM773005
9 GSM772811_BI.Adult_Kidney.H3K9ac.27.sga Adult Kidney|H3K9ac|rep 1 H3K9ac GSM772811
10 GSM773006_BI.Adult_Kidney.H3K9ac.153.sga Adult Kidney|H3K9ac|rep 2 H3K9ac GSM773006
11 GSM621651_BI.Adult_Kidney.H3K9me3.27.sga Adult Kidney|H3K9me3|rep 1 H3K9me3 GSM621651
12 GSM773026_BI.Adult_Kidney.H3K9me3.153.sga Adult Kidney|H3K9me3|rep 2 H3K9me3 GSM773026
13 GSM621638_BI.Adult_Kidney.Input.27.sga Adult Kidney|Input|rep 1 WCE GSM621638
14 GSM773025_BI.Adult_Kidney.Input.153.sga Adult Kidney|Input|rep 2 WCE GSM773025
15 GSM1013133_UCSD.Bladder.H3K27ac.STL003.sga Bladder|H3K27ac H3K27ac GSM1013133
16 GSM1059441_UCSD.Bladder.H3K36me3.STL003.sga Bladder|H3K36me3 H3K36me3 GSM1059441
17 GSM1059450_UCSD.Bladder.H3K4me1.STL003.sga Bladder|H3K4me1 H3K4me1 GSM1059450
18 GSM1059457_UCSD.Bladder.Input.STL003.CY49.sga Bladder|Input|rep 1 Input GSM1059457
19 GSM906414_UCSD.Bladder.Input.STL003.sga Bladder|Input|rep 2 Input GSM906414

Technical Notes

BED files were downloaded from the FTP and converted in SGA format using bed2sga (ChIP-seq).

References

Genome browser viewable files