Fetal heart.

Description

This samples serie was produced as part of the RoadMap Project.

Source

Files downloaded from GEO FTP server: ftp://ftp.ncbi.nlm.nih.gov/pub/geo/DATA/roadmapepigenomics/by_sample/
Input file format: BED

Samples

From Human Feb. 2009 (GRCh37/hg19) Assembly.

ChIP-seq data:

Filename Description Feature GEO-ID
1 GSM621450_BI.Fetal_Heart.H3K27me3.UW_H-22727.sga Fetal Heart|H3K27me3 H3K27me3 GSM621450
2 GSM621392_BI.Fetal_Heart.H3K36me3.UW_H-22727.sga Fetal Heart|H3K36me3 H3K36me3 GSM621392
3 GSM706848_BI.Fetal_Heart.H3K4me1.H-23524.sga Fetal Heart|H3K4me1|rep 1 H3K4me1 GSM706848
4 GSM772732_BI.Fetal_Heart.H3K4me1.UW_H23914.sga Fetal Heart|H3K4me1|rep 2 H3K4me1 GSM772732
5 GSM772735_BI.Fetal_Heart.H3K4me3.UW_H23914.sga Fetal Heart|H3K4me3 H3K4me3 GSM772735
6 GSM706849_BI.Fetal_Heart.H3K9ac.H-23524.sga Fetal Heart|H3K9ac H3K9ac GSM706849
7 GSM621434_BI.Fetal_Heart.H3K9me3.UW_H-22727.sga Fetal Heart|H3K9me3 H3K9me3 GSM621434
8 GSM621396_BI.Fetal_Heart.Input.UW_H-22727.sga Fetal Heart|Input|rep 1 WCE GSM621396
9 GSM706856_BI.Fetal_Heart.Input.H-23468.sga Fetal Heart|Input|rep 2 WCE GSM706856

DNase FAIRE data:

Filename Description Feature GEO-ID
1 GSM723023_UW.Fetal_Heart.Digital_Genomic_Footprinting.H-22662.DGF.DS12531.sga Fetal Heart|DNase-HS DNase-HS GSM723023
2 GSM530654_UW.Fetal_Heart.ChromatinAccessibility.H-22662.DS12531.sga Fetal Heart|DNase-seq|rep 1 DNase-seq GSM530654
3 GSM817220_UW.Fetal_Heart.ChromatinAccessibility.H-23744.DS19431.sga Fetal Heart|DNase-seq|rep 10 DNase-seq GSM817220
4 GSM878630_UW.Fetal_Heart.ChromatinAccessibility.H-24042.DS19427.sga Fetal Heart|DNase-seq|rep 11 DNase-seq GSM878630
5 GSM530661_UW.Fetal_Heart.ChromatinAccessibility.H-22727.DS12810.sga Fetal Heart|DNase-seq|rep 2 DNase-seq GSM530661
6 GSM665811_UW.Fetal_Heart.ChromatinAccessibility.H-23468.DS15839.sga Fetal Heart|DNase-seq|rep 3 DNase-seq GSM665811
7 GSM665814_UW.Fetal_Heart.ChromatinAccessibility.H-23500.DS16018.sga Fetal Heart|DNase-seq|rep 4 DNase-seq GSM665814
8 GSM665817_UW.Fetal_Heart.ChromatinAccessibility.H-23524.DS16146.sga Fetal Heart|DNase-seq|rep 5 DNase-seq GSM665817
9 GSM665824_UW.Fetal_Heart.ChromatinAccessibility.H-23589.DS16500.sga Fetal Heart|DNase-seq|rep 6 DNase-seq GSM665824
10 GSM665830_UW.Fetal_Heart.ChromatinAccessibility.H-23604.DS16582.sga Fetal Heart|DNase-seq|rep 7 DNase-seq GSM665830
11 GSM665831_UW.Fetal_Heart.ChromatinAccessibility.H-23617.DS16621.sga Fetal Heart|DNase-seq|rep 8 DNase-seq GSM665831
12 GSM774203_UW.Fetal_Heart.ChromatinAccessibility.H-23663.DS16819.sga Fetal Heart|DNase-seq|rep 9 DNase-seq GSM774203
13 GSM665809.sga sga| DNase-seq GSM665809

Technical Notes

BED files were downloaded from the FTP and converted in SGA format using bed2sga (ChIP-seq).

References

Genome browser viewable files