Adult lung.

Description

This samples serie was produced as part of the RoadMap Project.

Source

Files downloaded from GEO FTP server: ftp://ftp.ncbi.nlm.nih.gov/pub/geo/DATA/roadmapepigenomics/by_sample/
Input file format: BED

Samples

From Human Feb. 2009 (GRCh37/hg19) Assembly.

ChIP-seq data:

Filename Description Feature GEO-ID
1 GSM1013123_UCSD.Lung.H3K27ac.STL001.sga Lung|H3K27ac|rep 1 H3K27ac GSM1013123
2 GSM906395_UCSD.Lung.H3K27ac.STL002.sga Lung|H3K27ac|rep 2 H3K27ac GSM906395
3 GSM1059437_UCSD.Lung.H3K36me3.STL001.sga Lung|H3K36me3|rep 1 H3K36me3 GSM1059437
4 GSM956014_UCSD.Lung.H3K36me3.STL002.sga Lung|H3K36me3|rep 2 H3K36me3 GSM956014
5 GSM1059443_UCSD.Lung.H3K4me1.STL001.sga Lung|H3K4me1|rep 1 H3K4me1 GSM1059443
6 GSM910572_UCSD.Lung.H3K4me1.STL002.sga Lung|H3K4me1|rep 2 H3K4me1 GSM910572
7 GSM915336_UCSD.Lung.H3K4me3.STL002.sga Lung|H3K4me3 H3K4me3 GSM915336
8 GSM1120355_UCSD.Lung.H3K9me3.STL001.sga Lung|H3K9me3|rep 1 H3K9me3 GSM1120355
9 GSM906411_UCSD.Lung.H3K9me3.STL002.sga Lung|H3K9me3|rep 2 H3K9me3 GSM906411
10 GSM1013165_UCSD.Lung.Input.STL001.sga Lung|Input|rep 1 Input GSM1013165
11 GSM906417_UCSD.Lung.Input.STL002.sga Lung|Input|rep 2 Input GSM906417
12 GSM956031_UCSD.Lung.Input.STL002.AY296.sga Lung|Input|rep 3 Input GSM956031

Technical Notes

BED files were downloaded from the FTP and converted in SGA format using bed2sga (ChIP-seq).

References

Genome browser viewable files