waszak15, Variation and genetic control of chromatin architecture in humans

Description

ChIP-seq against several histone modifications (H3K4me3, H3K4me1, H3K27ac), the transcription factor PU.1 and RNA polymerase II (RPB2) in lymphoblastoid cell lines from 47 whole-genome sequenced individuals.

Source

Samples

From Human Feb. 2009 (GRCh37/hg19) Assembly.

ChIP-seq data:

Filename Description Feature GEO-ID
1 E-MTAB-3657.IP_06985_H3K27ac_120628_3_sorted.sga NA06985|H3K27ac H3K27ac -
2 E-MTAB-3657.IP_06985_H3K4me1_merge_sorted.sga NA06985|H3K4me1 H3K4me1 -
3 E-MTAB-3657.IP_06985_H3K4me3_120521_7_sorted.sga NA06985|H3K4me3 H3K4me3 -
4 E-MTAB-3657.IP_06985_PU1_120521_6_sorted.sga NA06985|PU1 PU1 -
5 E-MTAB-3657.IP_06985_RPB2_merge_sorted.sga NA06985|RPB2 RPB2 -
6 E-MTAB-3657.IP_06986_H3K27ac_120628_3_sorted.sga NA06986|H3K27ac H3K27ac -
7 E-MTAB-3657.IP_06986_H3K4me1_merge_sorted.sga NA06986|H3K4me1 H3K4me1 -
8 E-MTAB-3657.IP_06986_H3K4me3_merge_sorted.sga NA06986|H3K4me3 H3K4me3 -
9 E-MTAB-3657.IP_06986_PU1_120605_7_sorted.sga NA06986|PU1 PU1 -
10 E-MTAB-3657.IP_06986_RPB2_merge_sorted.sga NA06986|RPB2 RPB2 -
11 E-MTAB-3657.IP_06994_H3K27ac_merge_sorted.sga NA06994|H3K27ac H3K27ac -
12 E-MTAB-3657.IP_06994_H3K4me1_merge_sorted.sga NA06994|H3K4me1 H3K4me1 -
13 E-MTAB-3657.IP_06994_H3K4me3_120521_8_sorted.sga NA06994|H3K4me3 H3K4me3 -
14 E-MTAB-3657.IP_06994_PU1_120605_4_sorted.sga NA06994|PU1 PU1 -
15 E-MTAB-3657.IP_06994_RPB2_merge_sorted.sga NA06994|RPB2 RPB2 -
16 E-MTAB-3657.IP_07037_H3K27ac_merge_sorted.sga NA07037|H3K27ac H3K27ac -
17 E-MTAB-3657.IP_07037_H3K4me1_merge_sorted.sga NA07037|H3K4me1 H3K4me1 -
18 E-MTAB-3657.IP_07037_H3K4me3_120521_6_sorted.sga NA07037|H3K4me3 H3K4me3 -
19 E-MTAB-3657.IP_07037_PU1_120521_7_sorted.sga NA07037|PU1 PU1 -
20 E-MTAB-3657.IP_07037_RPB2_merge_sorted.sga NA07037|RPB2 RPB2 -
21 E-MTAB-3657.IP_07048_H3K27ac_merge_sorted.sga NA07048|H3K27ac H3K27ac -
22 E-MTAB-3657.IP_07048_H3K4me1_merge_sorted.sga NA07048|H3K4me1 H3K4me1 -
23 E-MTAB-3657.IP_07048_H3K4me3_merge_sorted.sga NA07048|H3K4me3 H3K4me3 -
24 E-MTAB-3657.IP_07048_PU1_120521_8_sorted.sga NA07048|PU1 PU1 -
25 E-MTAB-3657.IP_07048_RPB2_merge_sorted.sga NA07048|RPB2 RPB2 -
26 E-MTAB-3657.IP_07051_H3K27ac_120628_5_sorted.sga NA07051|H3K27ac H3K27ac -
27 E-MTAB-3657.IP_07051_H3K4me1_merge_sorted.sga NA07051|H3K4me1 H3K4me1 -
28 E-MTAB-3657.IP_07051_H3K4me3_120605_2_sorted.sga NA07051|H3K4me3 H3K4me3 -
29 E-MTAB-3657.IP_07051_PU1_merge_sorted.sga NA07051|PU1 PU1 -
30 E-MTAB-3657.IP_07051_RPB2_merge_sorted.sga NA07051|RPB2 RPB2 -
31 E-MTAB-3657.IP_07056_H3K27ac_merge_sorted.sga NA07056|H3K27ac H3K27ac -
32 E-MTAB-3657.IP_07056_H3K4me1_merge_sorted.sga NA07056|H3K4me1 H3K4me1 -
33 E-MTAB-3657.IP_07056_H3K4me3_120521_6_sorted.sga NA07056|H3K4me3 H3K4me3 -
34 E-MTAB-3657.IP_07056_PU1_120605_4_sorted.sga NA07056|PU1 PU1 -
35 E-MTAB-3657.IP_07056_RPB2_merge_sorted.sga NA07056|RPB2 RPB2 -
36 E-MTAB-3657.IP_07346_H3K27ac_120628_6_sorted.sga NA07346|H3K27ac H3K27ac -
37 E-MTAB-3657.IP_07346_H3K4me1_merge_sorted.sga NA07346|H3K4me1 H3K4me1 -
38 E-MTAB-3657.IP_07346_H3K4me3_120605_4_sorted.sga NA07346|H3K4me3 H3K4me3 -
39 E-MTAB-3657.IP_07346_PU1_120605_6_sorted.sga NA07346|PU1 PU1 -
40 E-MTAB-3657.IP_07346_RPB2_merge_sorted.sga NA07346|RPB2 RPB2 -
41 E-MTAB-3657.IP_07357_H3K27ac_120628_6_sorted.sga NA07357|H3K27ac H3K27ac -
42 E-MTAB-3657.IP_07357_H3K4me1_merge_sorted.sga NA07357|H3K4me1 H3K4me1 -
43 E-MTAB-3657.IP_07357_H3K4me3_120605_5_sorted.sga NA07357|H3K4me3 H3K4me3 -
44 E-MTAB-3657.IP_07357_PU1_120612_1_sorted.sga NA07357|PU1 PU1 -
45 E-MTAB-3657.IP_07357_RPB2_merge_sorted.sga NA07357|RPB2 RPB2 -
46 E-MTAB-3657.IP_10847_H3K27ac_120628_7_sorted.sga NA10847|H3K27ac H3K27ac -
47 E-MTAB-3657.IP_10847_H3K4me1_merge_sorted.sga NA10847|H3K4me1 H3K4me1 -
48 E-MTAB-3657.IP_10847_H3K4me3_merge_sorted.sga NA10847|H3K4me3 H3K4me3 -
49 E-MTAB-3657.IP_10847_PU1_120612_7_sorted.sga NA10847|PU1 PU1 -
50 E-MTAB-3657.IP_10847_RPB2_merge_sorted.sga NA10847|RPB2 RPB2 -
51 E-MTAB-3657.IP_10851_H3K27ac_120628_7_sorted.sga NA10851|H3K27ac H3K27ac -
52 E-MTAB-3657.IP_10851_H3K4me1_merge_sorted.sga NA10851|H3K4me1 H3K4me1 -
53 E-MTAB-3657.IP_10851_H3K4me3_120521_1_sorted.sga NA10851|H3K4me3 H3K4me3 -
54 E-MTAB-3657.IP_10851_PU1_120605_3_sorted.sga NA10851|PU1 PU1 -
55 E-MTAB-3657.IP_10851_RPB2_merge_sorted.sga NA10851|RPB2 RPB2 -
56 E-MTAB-3657.IP_11829_H3K27ac_120628_7_sorted.sga NA11829|H3K27ac H3K27ac -
57 E-MTAB-3657.IP_11829_H3K4me1_merge_sorted.sga NA11829|H3K4me1 H3K4me1 -
58 E-MTAB-3657.IP_11829_H3K4me3_120521_1_sorted.sga NA11829|H3K4me3 H3K4me3 -
59 E-MTAB-3657.IP_11829_PU1_120521_1_sorted.sga NA11829|PU1 PU1 -
60 E-MTAB-3657.IP_11829_RPB2_merge_sorted.sga NA11829|RPB2 RPB2 -
61 E-MTAB-3657.IP_11830_H3K27ac_120815_7_sorted.sga NA11830|H3K27ac H3K27ac -
62 E-MTAB-3657.IP_11830_H3K4me1_merge_sorted.sga NA11830|H3K4me1 H3K4me1 -
63 E-MTAB-3657.IP_11830_H3K4me3_120521_3_sorted.sga NA11830|H3K4me3 H3K4me3 -
64 E-MTAB-3657.IP_11830_PU1_merge_sorted.sga NA11830|PU1 PU1 -
65 E-MTAB-3657.IP_11830_RPB2_120726_1_sorted.sga NA11830|RPB2 RPB2 -
66 E-MTAB-3657.IP_11831_H3K27ac_120628_8_sorted.sga NA11831|H3K27ac H3K27ac -
67 E-MTAB-3657.IP_11831_H3K4me1_merge_sorted.sga NA11831|H3K4me1 H3K4me1 -
68 E-MTAB-3657.IP_11831_H3K4me3_120521_4_sorted.sga NA11831|H3K4me3 H3K4me3 -
69 E-MTAB-3657.IP_11831_PU1_merge_sorted.sga NA11831|PU1 PU1 -
70 E-MTAB-3657.IP_11831_RPB2_merge_sorted.sga NA11831|RPB2 RPB2 -
71 E-MTAB-3657.IP_11832_H3K27ac_120628_8_sorted.sga NA11832|H3K27ac H3K27ac -
72 E-MTAB-3657.IP_11832_H3K4me1_merge_sorted.sga NA11832|H3K4me1 H3K4me1 -
73 E-MTAB-3657.IP_11832_H3K4me3_120605_5_sorted.sga NA11832|H3K4me3 H3K4me3 -
74 E-MTAB-3657.IP_11832_PU1_120612_2_sorted.sga NA11832|PU1 PU1 -
75 E-MTAB-3657.IP_11832_RPB2_merge_sorted.sga NA11832|RPB2 RPB2 -
76 E-MTAB-3657.IP_11840_H3K27ac_120628_8_sorted.sga NA11840|H3K27ac H3K27ac -
77 E-MTAB-3657.IP_11840_H3K4me1_merge_sorted.sga NA11840|H3K4me1 H3K4me1 -
78 E-MTAB-3657.IP_11840_H3K4me3_120605_8_sorted.sga NA11840|H3K4me3 H3K4me3 -
79 E-MTAB-3657.IP_11840_PU1_merge_sorted.sga NA11840|PU1 PU1 -
80 E-MTAB-3657.IP_11840_RPB2_merge_sorted.sga NA11840|RPB2 RPB2 -
81 E-MTAB-3657.IP_11881_H3K27ac_120628_1_sorted.sga NA11881|H3K27ac H3K27ac -
82 E-MTAB-3657.IP_11881_H3K4me1_merge_sorted.sga NA11881|H3K4me1 H3K4me1 -
83 E-MTAB-3657.IP_11881_H3K4me3_120521_5_sorted.sga NA11881|H3K4me3 H3K4me3 -
84 E-MTAB-3657.IP_11881_PU1_120612_1_sorted.sga NA11881|PU1 PU1 -
85 E-MTAB-3657.IP_11881_RPB2_merge_sorted.sga NA11881|RPB2 RPB2 -
86 E-MTAB-3657.IP_11894_H3K27ac_120628_1_sorted.sga NA11894|H3K27ac H3K27ac -
87 E-MTAB-3657.IP_11894_H3K4me1_merge_sorted.sga NA11894|H3K4me1 H3K4me1 -
88 E-MTAB-3657.IP_11894_H3K4me3_120521_2_sorted.sga NA11894|H3K4me3 H3K4me3 -
89 E-MTAB-3657.IP_11894_PU1_120521_2_sorted.sga NA11894|PU1 PU1 -
90 E-MTAB-3657.IP_11894_RPB2_merge_sorted.sga NA11894|RPB2 RPB2 -
91 E-MTAB-3657.IP_11918_H3K27ac_120628_1_sorted.sga NA11918|H3K27ac H3K27ac -
92 E-MTAB-3657.IP_11918_H3K4me1_merge_sorted.sga NA11918|H3K4me1 H3K4me1 -
93 E-MTAB-3657.IP_11918_H3K4me3_merge_sorted.sga NA11918|H3K4me3 H3K4me3 -
94 E-MTAB-3657.IP_11918_PU1_120521_3_sorted.sga NA11918|PU1 PU1 -
95 E-MTAB-3657.IP_11918_RPB2_merge_sorted.sga NA11918|RPB2 RPB2 -
96 E-MTAB-3657.IP_11920_H3K27ac_120628_2_sorted.sga NA11920|H3K27ac H3K27ac -
97 E-MTAB-3657.IP_11920_H3K4me1_merge_sorted.sga NA11920|H3K4me1 H3K4me1 -
98 E-MTAB-3657.IP_11920_H3K4me3_120605_2_sorted.sga NA11920|H3K4me3 H3K4me3 -
99 E-MTAB-3657.IP_11920_PU1_120605_4_sorted.sga NA11920|PU1 PU1 -
100 E-MTAB-3657.IP_11920_RPB2_120515_8_sorted.sga NA11920|RPB2 RPB2 -
101 E-MTAB-3657.IP_11931_H3K27ac_120628_2_sorted.sga NA11931|H3K27ac H3K27ac -
102 E-MTAB-3657.IP_11931_H3K4me1_merge_sorted.sga NA11931|H3K4me1 H3K4me1 -
103 E-MTAB-3657.IP_11931_H3K4me3_120605_7_sorted.sga NA11931|H3K4me3 H3K4me3 -
104 E-MTAB-3657.IP_11931_PU1_120605_8_sorted.sga NA11931|PU1 PU1 -
105 E-MTAB-3657.IP_11931_RPB2_merge_sorted.sga NA11931|RPB2 RPB2 -
106 E-MTAB-3657.IP_11992_H3K27ac_120628_2_sorted.sga NA11992|H3K27ac H3K27ac -
107 E-MTAB-3657.IP_11992_H3K4me1_merge_sorted.sga NA11992|H3K4me1 H3K4me1 -
108 E-MTAB-3657.IP_11992_H3K4me3_120521_6_sorted.sga NA11992|H3K4me3 H3K4me3 -
109 E-MTAB-3657.IP_11992_PU1_120612_1_sorted.sga NA11992|PU1 PU1 -
110 E-MTAB-3657.IP_11992_RPB2_merge_sorted.sga NA11992|RPB2 RPB2 -
111 E-MTAB-3657.IP_11993_H3K27ac_120628_2_sorted.sga NA11993|H3K27ac H3K27ac -
112 E-MTAB-3657.IP_11993_H3K4me1_merge_sorted.sga NA11993|H3K4me1 H3K4me1 -
113 E-MTAB-3657.IP_11993_H3K4me3_merge_sorted.sga NA11993|H3K4me3 H3K4me3 -
114 E-MTAB-3657.IP_11993_PU1_120521_5_sorted.sga NA11993|PU1 PU1 -
115 E-MTAB-3657.IP_11993_RPB2_120726_1_sorted.sga NA11993|RPB2 RPB2 -
116 E-MTAB-3657.IP_11994_H3K27ac_120628_3_sorted.sga NA11994|H3K27ac H3K27ac -
117 E-MTAB-3657.IP_11994_H3K4me1_merge_sorted.sga NA11994|H3K4me1 H3K4me1 -
118 E-MTAB-3657.IP_11994_H3K4me3_120605_5_sorted.sga NA11994|H3K4me3 H3K4me3 -
119 E-MTAB-3657.IP_11994_PU1_120605_7_sorted.sga NA11994|PU1 PU1 -
120 E-MTAB-3657.IP_11994_RPB2_merge_sorted.sga NA11994|RPB2 RPB2 -
121 E-MTAB-3657.IP_12005_H3K27ac_120628_3_sorted.sga NA12005|H3K27ac H3K27ac -
122 E-MTAB-3657.IP_12005_H3K4me1_merge_sorted.sga NA12005|H3K4me1 H3K4me1 -
123 E-MTAB-3657.IP_12005_H3K4me3_merge_sorted.sga NA12005|H3K4me3 H3K4me3 -
124 E-MTAB-3657.IP_12005_PU1_120605_7_sorted.sga NA12005|PU1 PU1 -
125 E-MTAB-3657.IP_12005_RPB2_120515_1_sorted.sga NA12005|RPB2 RPB2 -
126 E-MTAB-3657.IP_12043_H3K27ac_120628_3_sorted.sga NA12043|H3K27ac H3K27ac -
127 E-MTAB-3657.IP_12043_H3K4me1_merge_sorted.sga NA12043|H3K4me1 H3K4me1 -
128 E-MTAB-3657.IP_12043_H3K4me3_120521_7_sorted.sga NA12043|H3K4me3 H3K4me3 -
129 E-MTAB-3657.IP_12043_PU1_120605_5_sorted.sga NA12043|PU1 PU1 -
130 E-MTAB-3657.IP_12043_RPB2_merge_sorted.sga NA12043|RPB2 RPB2 -
131 E-MTAB-3657.IP_12154_H3K27ac_120628_3_sorted.sga NA12154|H3K27ac H3K27ac -
132 E-MTAB-3657.IP_12154_H3K4me1_merge_sorted.sga NA12154|H3K4me1 H3K4me1 -
133 E-MTAB-3657.IP_12154_H3K4me3_120521_6_sorted.sga NA12154|H3K4me3 H3K4me3 -
134 E-MTAB-3657.IP_12154_PU1_120521_6_sorted.sga NA12154|PU1 PU1 -
135 E-MTAB-3657.IP_12154_RPB2_merge_sorted.sga NA12154|RPB2 RPB2 -
136 E-MTAB-3657.IP_12156_H3K27ac_120628_4_sorted.sga NA12156|H3K27ac H3K27ac -
137 E-MTAB-3657.IP_12156_H3K4me1_merge_sorted.sga NA12156|H3K4me1 H3K4me1 -
138 E-MTAB-3657.IP_12156_H3K4me3_merge_sorted.sga NA12156|H3K4me3 H3K4me3 -
139 E-MTAB-3657.IP_12156_PU1_120605_5_sorted.sga NA12156|PU1 PU1 -
140 E-MTAB-3657.IP_12156_RPB2_merge_sorted.sga NA12156|RPB2 RPB2 -
141 E-MTAB-3657.IP_12234_H3K27ac_120628_4_sorted.sga NA12234|H3K27ac H3K27ac -
142 E-MTAB-3657.IP_12234_H3K4me1_merge_sorted.sga NA12234|H3K4me1 H3K4me1 -
143 E-MTAB-3657.IP_12234_H3K4me3_merge_sorted.sga NA12234|H3K4me3 H3K4me3 -
144 E-MTAB-3657.IP_12234_PU1_120612_6_sorted.sga NA12234|PU1 PU1 -
145 E-MTAB-3657.IP_12234_RPB2_merge_sorted.sga NA12234|RPB2 RPB2 -
146 E-MTAB-3657.IP_12249_H3K27ac_120628_5_sorted.sga NA12249|H3K27ac H3K27ac -
147 E-MTAB-3657.IP_12249_H3K4me1_merge_sorted.sga NA12249|H3K4me1 H3K4me1 -
148 E-MTAB-3657.IP_12249_H3K4me3_120605_8_sorted.sga NA12249|H3K4me3 H3K4me3 -
149 E-MTAB-3657.IP_12249_PU1_120612_4_sorted.sga NA12249|PU1 PU1 -
150 E-MTAB-3657.IP_12249_RPB2_120515_6_sorted.sga NA12249|RPB2 RPB2 -
151 E-MTAB-3657.IP_12275_H3K27ac_merge_sorted.sga NA12275|H3K27ac H3K27ac -
152 E-MTAB-3657.IP_12275_H3K4me1_merge_sorted.sga NA12275|H3K4me1 H3K4me1 -
153 E-MTAB-3657.IP_12275_H3K4me3_merge_sorted.sga NA12275|H3K4me3 H3K4me3 -
154 E-MTAB-3657.IP_12275_PU1_120605_3_sorted.sga NA12275|PU1 PU1 -
155 E-MTAB-3657.IP_12275_RPB2_120515_2_sorted.sga NA12275|RPB2 RPB2 -
156 E-MTAB-3657.IP_12282_H3K27ac_120628_4_sorted.sga NA12282|H3K27ac H3K27ac -
157 E-MTAB-3657.IP_12282_H3K4me1_merge_sorted.sga NA12282|H3K4me1 H3K4me1 -
158 E-MTAB-3657.IP_12282_H3K4me3_120521_7_sorted.sga NA12282|H3K4me3 H3K4me3 -
159 E-MTAB-3657.IP_12282_PU1_120521_7_sorted.sga NA12282|PU1 PU1 -
160 E-MTAB-3657.IP_12282_RPB2_120515_2_sorted.sga NA12282|RPB2 RPB2 -
161 E-MTAB-3657.IP_12286_H3K27ac_120628_5_sorted.sga NA12286|H3K27ac H3K27ac -
162 E-MTAB-3657.IP_12286_H3K4me1_merge_sorted.sga NA12286|H3K4me1 H3K4me1 -
163 E-MTAB-3657.IP_12286_H3K4me3_120521_8_sorted.sga NA12286|H3K4me3 H3K4me3 -
164 E-MTAB-3657.IP_12286_PU1_120521_8_sorted.sga NA12286|PU1 PU1 -
165 E-MTAB-3657.IP_12286_RPB2_merge_sorted.sga NA12286|RPB2 RPB2 -
166 E-MTAB-3657.IP_12287_H3K27ac_120628_5_sorted.sga NA12287|H3K27ac H3K27ac -
167 E-MTAB-3657.IP_12287_H3K4me1_merge_sorted.sga NA12287|H3K4me1 H3K4me1 -
168 E-MTAB-3657.IP_12287_H3K4me3_merge_sorted.sga NA12287|H3K4me3 H3K4me3 -
169 E-MTAB-3657.IP_12287_PU1_120605_6_sorted.sga NA12287|PU1 PU1 -
170 E-MTAB-3657.IP_12287_RPB2_merge_sorted.sga NA12287|RPB2 RPB2 -
171 E-MTAB-3657.IP_12383_H3K27ac_120628_5_sorted.sga NA12383|H3K27ac H3K27ac -
172 E-MTAB-3657.IP_12383_H3K4me1_merge_sorted.sga NA12383|H3K4me1 H3K4me1 -
173 E-MTAB-3657.IP_12383_H3K4me3_merge_sorted.sga NA12383|H3K4me3 H3K4me3 -
174 E-MTAB-3657.IP_12383_PU1_120605_6_sorted.sga NA12383|PU1 PU1 -
175 E-MTAB-3657.IP_12383_RPB2_merge_sorted.sga NA12383|RPB2 RPB2 -
176 E-MTAB-3657.IP_12489_H3K27ac_120628_6_sorted.sga NA12489|H3K27ac H3K27ac -
177 E-MTAB-3657.IP_12489_H3K4me1_merge_sorted.sga NA12489|H3K4me1 H3K4me1 -
178 E-MTAB-3657.IP_12489_H3K4me3_120605_7_sorted.sga NA12489|H3K4me3 H3K4me3 -
179 E-MTAB-3657.IP_12489_PU1_120605_7_sorted.sga NA12489|PU1 PU1 -
180 E-MTAB-3657.IP_12489_RPB2_merge_sorted.sga NA12489|RPB2 RPB2 -
181 E-MTAB-3657.IP_12750_H3K27ac_120628_6_sorted.sga NA12750|H3K27ac H3K27ac -
182 E-MTAB-3657.IP_12750_H3K4me1_merge_sorted.sga NA12750|H3K4me1 H3K4me1 -
183 E-MTAB-3657.IP_12750_H3K4me3_merge_sorted.sga NA12750|H3K4me3 H3K4me3 -
184 E-MTAB-3657.IP_12750_PU1_120521_1_sorted.sga NA12750|PU1 PU1 -
185 E-MTAB-3657.IP_12750_RPB2_120515_4_sorted.sga NA12750|RPB2 RPB2 -
186 E-MTAB-3657.IP_12760_H3K27ac_120628_3_sorted.sga NA12760|H3K27ac H3K27ac -
187 E-MTAB-3657.IP_12760_H3K4me1_merge_sorted.sga NA12760|H3K4me1 H3K4me1 -
188 E-MTAB-3657.IP_12760_H3K4me3_120521_3_sorted.sga NA12760|H3K4me3 H3K4me3 -
189 E-MTAB-3657.IP_12760_PU1_merge_sorted.sga NA12760|PU1 PU1 -
190 E-MTAB-3657.IP_12760_RPB2_merge_sorted.sga NA12760|RPB2 RPB2 -
191 E-MTAB-3657.IP_12761_H3K27ac_merge_sorted.sga NA12761|H3K27ac H3K27ac -
192 E-MTAB-3657.IP_12761_H3K4me1_merge_sorted.sga NA12761|H3K4me1 H3K4me1 -
193 E-MTAB-3657.IP_12761_H3K4me3_120521_2_sorted.sga NA12761|H3K4me3 H3K4me3 -
194 E-MTAB-3657.IP_12761_PU1_120521_2_sorted.sga NA12761|PU1 PU1 -
195 E-MTAB-3657.IP_12761_RPB2_120726_2_sorted.sga NA12761|RPB2 RPB2 -
196 E-MTAB-3657.IP_12762_H3K27ac_120628_6_sorted.sga NA12762|H3K27ac H3K27ac -
197 E-MTAB-3657.IP_12762_H3K4me1_merge_sorted.sga NA12762|H3K4me1 H3K4me1 -
198 E-MTAB-3657.IP_12762_H3K4me3_120521_3_sorted.sga NA12762|H3K4me3 H3K4me3 -
199 E-MTAB-3657.IP_12762_PU1_merge_sorted.sga NA12762|PU1 PU1 -
200 E-MTAB-3657.IP_12762_RPB2_120515_8_sorted.sga NA12762|RPB2 RPB2 -
201 E-MTAB-3657.IP_12763_H3K27ac_120628_7_sorted.sga NA12763|H3K27ac H3K27ac -
202 E-MTAB-3657.IP_12763_H3K4me1_merge_sorted.sga NA12763|H3K4me1 H3K4me1 -
203 E-MTAB-3657.IP_12763_H3K4me3_120605_7_sorted.sga NA12763|H3K4me3 H3K4me3 -
204 E-MTAB-3657.IP_12763_PU1_120612_4_sorted.sga NA12763|PU1 PU1 -
205 E-MTAB-3657.IP_12763_RPB2_merge_sorted.sga NA12763|RPB2 RPB2 -
206 E-MTAB-3657.IP_12776_H3K27ac_120628_7_sorted.sga NA12776|H3K27ac H3K27ac -
207 E-MTAB-3657.IP_12776_H3K4me1_merge_sorted.sga NA12776|H3K4me1 H3K4me1 -
208 E-MTAB-3657.IP_12776_H3K4me3_120521_2_sorted.sga NA12776|H3K4me3 H3K4me3 -
209 E-MTAB-3657.IP_12776_PU1_120605_5_sorted.sga NA12776|PU1 PU1 -
210 E-MTAB-3657.IP_12776_RPB2_merge_sorted.sga NA12776|RPB2 RPB2 -
211 E-MTAB-3657.IP_12812_H3K27ac_120628_7_sorted.sga NA12812|H3K27ac H3K27ac -
212 E-MTAB-3657.IP_12812_H3K4me1_merge_sorted.sga NA12812|H3K4me1 H3K4me1 -
213 E-MTAB-3657.IP_12812_H3K4me3_120521_3_sorted.sga NA12812|H3K4me3 H3K4me3 -
214 E-MTAB-3657.IP_12812_PU1_120605_8_sorted.sga NA12812|PU1 PU1 -
215 E-MTAB-3657.IP_12812_RPB2_120515_5_sorted.sga NA12812|RPB2 RPB2 -
216 E-MTAB-3657.IP_12813_H3K27ac_120628_4_sorted.sga NA12813|H3K27ac H3K27ac -
217 E-MTAB-3657.IP_12813_H3K4me1_merge_sorted.sga NA12813|H3K4me1 H3K4me1 -
218 E-MTAB-3657.IP_12813_H3K4me3_merge_sorted.sga NA12813|H3K4me3 H3K4me3 -
219 E-MTAB-3657.IP_12813_PU1_120521_4_sorted.sga NA12813|PU1 PU1 -
220 E-MTAB-3657.IP_12813_RPB2_merge_sorted.sga NA12813|RPB2 RPB2 -
221 E-MTAB-3657.IP_12814_H3K27ac_120628_7_sorted.sga NA12814|H3K27ac H3K27ac -
222 E-MTAB-3657.IP_12814_H3K4me1_merge_sorted.sga NA12814|H3K4me1 H3K4me1 -
223 E-MTAB-3657.IP_12814_H3K4me3_120521_4_sorted.sga NA12814|H3K4me3 H3K4me3 -
224 E-MTAB-3657.IP_12814_PU1_merge_sorted.sga NA12814|PU1 PU1 -
225 E-MTAB-3657.IP_12814_RPB2_120815_4_sorted.sga NA12814|RPB2 RPB2 -
226 E-MTAB-3657.IP_12815_H3K27ac_120628_8_sorted.sga NA12815|H3K27ac H3K27ac -
227 E-MTAB-3657.IP_12815_H3K4me1_merge_sorted.sga NA12815|H3K4me1 H3K4me1 -
228 E-MTAB-3657.IP_12815_H3K4me3_120521_5_sorted.sga NA12815|H3K4me3 H3K4me3 -
229 E-MTAB-3657.IP_12815_PU1_120605_8_sorted.sga NA12815|PU1 PU1 -
230 E-MTAB-3657.IP_12815_RPB2_120515_5_sorted.sga NA12815|RPB2 RPB2 -
231 E-MTAB-3657.IP_12873_H3K27ac_120628_8_sorted.sga NA12873|H3K27ac H3K27ac -
232 E-MTAB-3657.IP_12873_H3K4me1_merge_sorted.sga NA12873|H3K4me1 H3K4me1 -
233 E-MTAB-3657.IP_12873_H3K4me3_120605_4_sorted.sga NA12873|H3K4me3 H3K4me3 -
234 E-MTAB-3657.IP_12873_PU1_merge_sorted.sga NA12873|PU1 PU1 -
235 E-MTAB-3657.IP_12873_RPB2_merge_sorted.sga NA12873|RPB2 RPB2 -

Technical Notes

BAM files were converted to bed using bamToBed v2.12.0 (bedtools). SGA conversion was carried out using bed2sga.pl (ChIP-Seq v. 1.5.2).

References

Last update: 19 Jan 2016