ChIP-Seq

MGA Data Overview

    Assemblies: 20     Total number of Series: 408     Total number of Samples: 33197     more details

ChIP-Seq Mass Genome Annotation Data (MGA)

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H. sapiens (Dec 2013 GRCh38/hg38)

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H. sapiens (Feb 2009 GRCh37/hg19)

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H. sapiens (March 2006 NCBI36/hg18)

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M. musculus (March 2012 GRCm38/mm10)

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M. musculus (July 2007 NCBI37/mm9)

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R. norvegicus (Jul 2014 Rnor_6.0/rn6)

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M. mulatta (Nov 2015 BCM Mmul_8.0.1/rheMac8)

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C. familiaris (Sep 2011 CanFam3.1/canFam3)

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G. gallus (Dec 2015 Gallus_gallus-5.0/galGal5)

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D. rerio (July 2010 Zv9/danRer7)

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A. mellifera (Apr 2011 Amel_4.5/amel5)

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D. melanogaster (Aug 2014 BDGP Rel6 + ISO1 MT/dm6)

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D. melanogaster (Apr 2006 BDGP R5/dm3)

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C. elegans (Oct 2010 WBcel2015/ce10)

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C. elegans (May 2009 WS190/ce6)

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S. cerevisiae (Apr 2011 R64/sacCer3)

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S. pombe (Aug 2015 ASM294v2/spo2)

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A. thaliana (Feb 2011 TAIR10/araTha1)

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Z. mays (Oct 2013 NCBI B73 RefGen_v3/zm3)

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P. falciparum (Apr 2016 ASM276v2/pfa2)
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Background

The MGA Data Overview Page allows for data browsing. Data are organized by species, data type (ChIP-seq, DNase FAIRE etc., Genome Annotation, etc.), and series (experiments). Each series links to a description page which gives information about the experimental setup, the data samples and technical details of the data processing. Sample files (in SGA format) can be downloaded by clicking on the Filename link.

Last update October 2018