# NRSF qPCR sites- both positive and "negative" hits # All data derived from Mortazavi A, Leeper Thompson EC, Garcia ST, Myers RM, Wold B (2006) #Comparative genomics modeling of the NRSF/REST repressor network: from single conserved sites to genome-wide repertoire. Genome Res 16: 1208-1221. # coordinates are on human genome hg18 version and were obtained by BLAST analysis of Collins et al's provided primer sequences to obtain the exact regions analyzed # The regions below were all verified as positive hits, by having qPCR enrichment above 3 fold. Putative negatives were below 3 fold enrichment Chromosome Start Stop Enrichment chr19 59140699 59140719 1.07 chr11 2175453 2175473 1.01 chr22 31061195 31061215 2.59 chr16 391623 391643 1.16 chr13 112540765 112540785 4.63 chr15 41553596 41553616 1 chr21 33022627 33022647 57 chrX 152954872 152954892 1 chr7 116702551 116702571 4.33 chr7 127014992 127015012 1.27 chr19 59713466 59713486 2.14 chr19 59562104 59562124 1.8 chr13 27401332 27401352 1 chr22 31781842 31781862 1.61 chr7 126581007 126581027 1.64 chr13 29865107 29865127 3.52 chr9 131045649 131045669 1 chr10 55257221 55257241 3.93 chr7 90312394 90312414 1 chr22 30835216 30835236 22.51 chr11 5714780 5714800 1.3 chr19 59091934 59091954 19.01 chr22 31458234 31458254 1.26 chr16 145318 145338 1 chr14 53234689 53234709 1.7 chr22 31660539 31660559 2.21 chr5 141987683 141987703 1.76 chr22 31184558 31184578 1.18 chr7 26954289 26954309 2.35 chr11 64010849 64010869 1.16 chr16 275505 275525 1.55 chr16 110067 110087 1.17 chr22 30644758 30644778 1 chr6 108602345 108602365 2.08 chr22 30996322 30996342 1.25 chr7 142128132 142128146 1 chr22 31326493 31326513 4.83 chr22 30980261 30980281 2.95 chr19 59122963 59122983 160.56 chrX 122699949 122699969 1 chr1 227633279 227633299 18.64 chr20 31698617 31698637 7.28 chr20 44119448 44119468 18.14 chr22 30833114 30833134 114.59 chr2 165803240 165803260 41.62 chr8 9820071 9820091 10.09 chr1 1260295 1260315 6.49 chr11 72001500 72001521 29.37 chr19 12804363 12804383 244.05 chr2 230862435 230862456 140.71 chr19 59887712 59887732 136.1 chr6 153113720 153113740 29.37 chr20 10148319 10148329 338.24 chr14 92450340 92450360 753.32 chr15 87709201 87709221 11.12 chr2 234486385 234486405 13.23 chr20 61280784 61280805 1 chr19 59507757 59507777 66.49 chr2 219564848 219564869 8.56 chr21 33451737 33451757 51.07 chrX 48943525 48943545 46.53 chr19 4124203 4124224 36.28 chr5 131376300 131376320 53.98 chr11 115981636 115981656 186.13 chr22 31802559 31802579 119.44 chr19 51127872 51127892 2.91 chr16 164434 164454 19.21 chr16 160178 160198 3.66 chr13 78061541 78061562 48.31 chr20 60595598 60595619 10.32 chr8 143990504 143990525 35.9 chr1 26607774 26607794 364.24 chr1 110887033 110887053 24.42 chrX 32065774 32065794 185.02 chr8 24826245 24826266 11.15 chr11 46370840 46370860 193.2 chr19 60383380 60383400 147.7 chr19 59098325 59098345 152.64 chr19 10667633 10667654 131.86 chr7 126535207 126535227 564.13 chr3 125419250 125419270 113.57 chrX 152794151 152794172 110.79 chr8 35409506 35409526 80.44 chr22 15981395 15981416 31.23 chr10 105028754 105028774 210.1 chr1 154651076 154651097 7.97 chr16 82011506 82011526 47.55 chr7 130200940 130200961 48.03 chr17 3248000 3248021 39.39 chr11 27698799 27698819 12.95 chr20 5840349 5840369 14.33 chr5 145700445 145700466 120.19 chr15 70399192 70399213 88.35 chr1 114499363 114499383 34.01 chr10 26696931 26696951 119.24 chr11 125936579 125936600 129.56 chr1 203694879 203694900 79.6 chr5 151284508 151284529 321.52 chr3 182517155 182517175 52.36 chr17 35002298 35002318 86.17 chr2 171379112 171379133 20.13 chr8 80684340 80684362 36.41 chr16 88520413 88520434 213.11 chr19 51147827 51147847 138.15 chr18 53265509 53265530 80.28 chr7 8449128 8449148 83.3 chr4 158360990 158361011 112.66 chr8 67252432 67252452 140.22 chr2 219881285 219881305 87.9 chr16 8933389 8933410 71.92 chr19 56748431 56748452 41.86 chr1 152807054 152807074 75.2 chr15 71426296 71426316 261.5