; convert-matrix -v 1 -i $RSAT/public_html/tmp/wwwrun/2013/01/11/peak-motifs.2013-01-11.110705_2013-01-11.110705_PdhmNx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/wwwrun/2013/01/11/peak-motifs.2013-01-11.110705_2013-01-11.110705_PdhmNx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices.txt ; Input files ; input /home/rsat/rsa-tools/public_html/tmp/wwwrun/2013/01/11/peak-motifs.2013-01-11.110705_2013-01-11.110705_PdhmNx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices.tf ; Input format transfac ; Output files ; output /home/rsat/rsa-tools/public_html/tmp/wwwrun/2013/01/11/peak-motifs.2013-01-11.110705_2013-01-11.110705_PdhmNx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices.txt ; Output format tab ; pseudo-weight 1 a 237 426 84 1 1 178 0 456 265 0 1319 1318 550 257 c 455 268 57 1 40 1142 1320 266 1 0 0 2 202 358 g 349 370 74 0 0 0 0 176 1054 1138 0 0 315 228 t 279 256 1105 1318 1279 0 0 422 0 182 1 0 253 477 // a 169 181 354 0 0 602 45 0 87 602 16 139 146 c 139 111 41 0 0 1 263 0 516 0 63 133 174 g 162 146 192 0 603 0 243 1 0 1 41 148 115 t 133 165 16 603 0 0 52 602 0 0 483 183 168 // a 381 217 0 4 8 1 597 450 1 1213 1217 492 233 c 271 347 0 0 1168 1214 612 1 0 3 2 185 354 g 337 158 3 1 0 4 10 768 1195 0 0 333 244 t 230 497 1216 1214 43 0 0 0 23 3 0 209 388 // ; Host name rsat ; Job started 2013-01-11.110736 ; Job done 2013-01-11.110736 ; Seconds 0.15 ; user 0.15 ; system 0 ; cuser 0 ; csystem 0