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PWMScan - Genome-wide position weight matrix (PWM) scanner

Target Databases
Genome Assemblies :

If you don't find your favorite genome assembly, please contact us, and we will try to make it available.

Weight Matrix
PWMs from Library     
        Motif Library:  
        Motif :  
Custom Weight Matrix
         Matrix Format
                     

  Paste Matrix
                     
                     

  Or Upload (text File containing the matrix)
                      from a FILE :
                     
                     

                      or from a URL:
                     

Consensus sequence
                     
Scanning Options
        Search Strand
        Reference Position
  Non-overlapping matches

     

plus
Background


Last update October 2017