PWMScan - Genome-wide position weight matrix (PWM) scanner

Target Databases
Genome Assemblies :

If you don't find your favorite genome assembly, please contact us, and we will try to make it available.

Weight Matrix
PWMs from Library     
        Motif Library:  
        Motif :  
Custom Weight Matrix
Matrix Format

Paste Matrix

Or Upload (text File containing the matrix)
                      from a FILE :

                      or from a URL:

Consensus sequence
Scanning Options
  Search Strand
  Reference Position
  Non-overlapping matches



Last update September 2017