PWMTools

PWMScan - Genome-wide position weight matrix (PWM) scanner

Target Databases
Genome Assemblies :

Weight Matrix
PWMs from Library     
        Motif Library:  
        Motif :  
Custom Weight Matrix
Matrix Format
                     

Paste Matrix (JASPAR, TRANSFAC, PFM, LPM, SSA or plain-text PWM)
                     
                     

Or Upload (text File containing the matrix)
                      from a FILE :
                     
                      or from a URL:
                     

Consensus sequence
                           
Scanning Options
  Search Strand
  Reference Position
  Non-overlapping matches

     

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Background


Last update February 2017