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ChIP-Seq

ChIP-Peak Analysis Module

Signal Peak Location Tool v1.5.3

ChIP-Seq Input Data
Select available Data Sets
      Genome :   
      Data Type :   
      Series :   
      Sample :   

Server-resident SGA Files by Filename
      Filename :
      Experiment :
      Feature  :      

Upload custom Data
     
      from a FILE (gzip or zip formats are also accepted):
     
      or from a URL:
     
      Sort Input :       off     on       (For SGA only)
      Experiment :
      Feature  :     
 Genomes

Additional Input Data Options
      Strand :    +    -    any    oriented
      Centering :      
 Repeat Masker      

Peak Detection Parameters

    Window Width (bp)   :
    Vicinity Range (bp)   :
    Peak Threshold  :   Tag counts   Relative enrichment factor
              
    Count Cut-off  :    
Refine Peak Positions

Genome Viewing Parameters

    WIG Track Name   
     
    Chromosome Region   
           
     WIG Track Color Picker   :    

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Last update August 2017